| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7353 |
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| Symbol | |
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| ID | 6280717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010679 |
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| Strand | + |
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| Start bp | 81766 |
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| End bp | 82941 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642619532 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001893567 |
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| Protein GI | 187921978 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0424132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.297904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CACTTGACGA ACAGGCGGAC GCCGAGCAGA TCGACGCAGA GGCTGAGAAG
CCGCAACGGC CACTAACGAT ACGCGAACAG AAGTACCGGC AGGCCGAAGC CGAAGGCATG
AACCCGGAGG CTCTGGAAGC TCTTGAGTTC CGCATGAAAC TGCTTTATCC GTTCCTCGAT
GACGAAGACA CGCAGGAAAT CGTCGTCAAC GAAGTGGGCG AGATATGGTC ATGGAAGAAG
GGCAAGTGGG TTGTCGACAA GGTTCCCGAA CTGACCCTTG AGGTTCTTGA CTCAATCGGT
CGGAACCTTG CCAACTTTTC CCGCAAGACG TTTGATCGAC ACCACACGTC GTTGTCAGCC
TTCATGCCAG TAACCGGCGA GCGGATCGAA ATGACGCATC CGCCGACGTG CCCGGAGAAT
ACCCGCTATC TCAACGTGCG GAAACATTCT GTCCACACGT TCCAGCATGA GTCACTGGTA
AAGGCCGGCT ACTACGAGAA GACTCGACAC GAGTTTTCGA GCAGCGTGCC AAAGGAGCGT
CGGGACGAGT TGTTCGAGCA CCTGACCGAC GAAGAGAAGG AGCTGTGGAC GCTCATCACC
ACGGGCCGTT TTTCCGAGTT CATGGAAAAA GCGGTTGAGC ATCACCAGAA CATCGTGGCT
TCGGGCGCGA CCGGCAGCGG TAAGACTTCC TATCTTCGCT CGCTGTGCGA ATTTATTGAC
CACGACGAAC GAATTATCAC GGCCGAAGAC ACTCCCGAAA TGCCTTTGCC GAATCACCGG
AACCGCAACA GCCTGTTCTA CAAGAAGACT GACGACGGCG AAGGCGTTAA TGCAAAGGAC
GTGCTTCACT CGGTGATGCG GAAGACGCCG AACCGCGTCC TGATGGCCGA GCTGCGAGGC
GACGAGGCCA TGTATTACCT GTCTGGTGTC CTCTCGTCAG GCCACCCAGG CGGCCTAACC
ACGACTCACG CTAACTCGCC GAAGGACGCT TTTTTCCGGC TCGCGCTACT CATCAAGCAG
TCGGACGCGG GCCAAGGTCT CGAACTGCAA GATATTTTGA TGTTGCTGCG ACAAACTGTT
AACGTAGTCG TGCAAGTCAC GTTTAACCCG AAAGTGGGGC GTTACATTCC GGCGATTTAC
TACGACCCGA TGTACCGCCT TTCGCTCCTT GACTAA
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| Protein sequence | MSTTLDEQAD AEQIDAEAEK PQRPLTIREQ KYRQAEAEGM NPEALEALEF RMKLLYPFLD
DEDTQEIVVN EVGEIWSWKK GKWVVDKVPE LTLEVLDSIG RNLANFSRKT FDRHHTSLSA
FMPVTGERIE MTHPPTCPEN TRYLNVRKHS VHTFQHESLV KAGYYEKTRH EFSSSVPKER
RDELFEHLTD EEKELWTLIT TGRFSEFMEK AVEHHQNIVA SGATGSGKTS YLRSLCEFID
HDERIITAED TPEMPLPNHR NRNSLFYKKT DDGEGVNAKD VLHSVMRKTP NRVLMAELRG
DEAMYYLSGV LSSGHPGGLT TTHANSPKDA FFRLALLIKQ SDAGQGLELQ DILMLLRQTV
NVVVQVTFNP KVGRYIPAIY YDPMYRLSLL D
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