| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7352 |
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| Symbol | |
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| ID | 6280697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010679 |
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| Strand | + |
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| Start bp | 80471 |
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| End bp | 81769 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642619531 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_001893566 |
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| Protein GI | 187921977 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.312586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC GCAAACAATC TCGCGGTGTC GCCAAGGACG ACCGCCAAGG TCTGAATGAA
CGAGTGCGGC CGACGACAAC CCCCGGCGAA AAACTGATTG CTTACGGCGC TGCTATTGGC
GGCCTGCTCA TCGTATTCGG TTCACTCGGC TACCGCTTCT GGTGGGTTCC GACGCACCAG
GCCCCGGTCG CGACTACGGC CGCAACAACT CAGCAGGCGG CGAACGGCGG GCGTCCGGCG
GGAATCTCTG CGCCTCAATT GAGTGTGCCC GACAACGTTT ACGGGCAGAC CGACGACGGC
ACCACGCCGA GCAACGGGCA ACAGCCATAT GGGGCAGGCT GGAACCCGAA CGGCCCGAGC
AACACGCCCG GTCTCATCAC CGGCAACGGG CAGGGTAACG GCCAAGGTAA CGCGCAAGAC
GCGGCAGCTC TCCAGCAGCA GCAACAGCAG CAGGCGTTGG CACAGCAACG TGCCCAGCAG
GAACAACAGA TCGAGGCGCG CAAGCTGTCC GGCAAGTTGG GTGATATGCC CAGCTCGCCC
CCTGCTTCGG GGACTCCCGT CAGGGCCGCG CAGGGTGCTC CGGGCGCTCC GTCGCCCGTG
GGTGTCGACG CCAACAAGGC GACCAAGGAC TTCGCCGCTT CGCTGATTCC AACTGTCACA
CCGAAGACGC GAGCCGCGTA TATCCCCAAT CCGAGTCTCA CCGTCAAGAA GGGAACGCCG
ATCCGTTGCA CGCTCGATAC TGCGATGAAC TCGGATCAAC CGTCGTTTCC GTCCTGCGTG
GTTTCGCGGC CCGTGTACAG CATGGACGGT AACGTGATCC TGATCGACGC CGGCAGCACT
GTAGATGGCG AAGTGACCAA AGGACCGGAG CGCGGAAAGA AGCGTCAAGC CGCGCTTTGG
GGCCGACTCG TCATGCCCGA TAACACAACC ATCGAACTCG ACTCGCCCGC TACCGACACT
CTCGGCGCAG GCGGCATGAC TGGTTCCATC AACAACCACT ACTGCGAACG CTATTGCGGA
GCATTCCTGT ATTCGACCTT TGAAGACATC GAACAGGTTG GCGTATCACT TGCTGGCAAA
TCGAGCGGCA ACGGCAACAC GAATATCGTG CTTCCGCAAA ACACCATGTC TACCGCCAAC
AGTGCGACGA ACGAAATGCT CACGCAGGGC CGCGACATTC AGCCGACGTT CAGCAAAAAT
CAGGGGGACG AAATCACGAT CACCGTTGGC CGCGATCTTG ATTTTTCGAC GGTCTATCAC
CTTGCACCCG TTACCGCGCG CAACACGGAC AATCCATGA
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| Protein sequence | MKLRKQSRGV AKDDRQGLNE RVRPTTTPGE KLIAYGAAIG GLLIVFGSLG YRFWWVPTHQ
APVATTAATT QQAANGGRPA GISAPQLSVP DNVYGQTDDG TTPSNGQQPY GAGWNPNGPS
NTPGLITGNG QGNGQGNAQD AAALQQQQQQ QALAQQRAQQ EQQIEARKLS GKLGDMPSSP
PASGTPVRAA QGAPGAPSPV GVDANKATKD FAASLIPTVT PKTRAAYIPN PSLTVKKGTP
IRCTLDTAMN SDQPSFPSCV VSRPVYSMDG NVILIDAGST VDGEVTKGPE RGKKRQAALW
GRLVMPDNTT IELDSPATDT LGAGGMTGSI NNHYCERYCG AFLYSTFEDI EQVGVSLAGK
SSGNGNTNIV LPQNTMSTAN SATNEMLTQG RDIQPTFSKN QGDEITITVG RDLDFSTVYH
LAPVTARNTD NP
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