Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7351 |
Symbol | |
ID | 6280696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010679 |
Strand | + |
Start bp | 79566 |
End bp | 80474 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642619530 |
Product | Conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_001893565 |
Protein GI | 187921976 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.280027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGAC GTTCCCTACG GTTCATCGCG CTCGCGGTGT GGGCCGTGTG CTCGGGCGCG CATGCACTCA CCATTCCGGA TTCTTCGCCG GAAGACGCTC ATTTGCAGCA TGCCCCCCTA ACTGATGACA TCGTAGCCAT CCAGTCGGAA GTAGGCCGCA TGACCGTCAT CCGCTTCGGC AAGGGCGAAG TCGTGCAGAA CTACGGGATG GGCGATGCCG ATGCGTGGGC CGTTGTGTTT TCGGGTAACG AACTCGACTT CGTGCCGAAG GCGCAAGAGG CAGACACGAA TCTGCGCGTC ATCACGAACC GGCGCAGTTA CTGGTTTTCT GTTGCGCTGA AAACCAACAG CTTCGTTACG CCCAGCCGCG ATGATGATGC ACAGCCGACG AGTCGCTACA AGAAGACGGC CGGGCGACCG AAGACCTACC TGCCTACGAC GTGGCAGCTC AATATCGACT ATCCGCCGGC AGAAGTCGCG AAGATCGCCG CCGAAGACCC TGCGGTGAAA GCGGCCAAGA CGAAGCACGA AATCGTTTCG GCATTTGACC AGGCCAAGAT GGAAGGCCGT CTTGACGCCG ACTACGGTTA CATCGGAGAC GATGAATTGC TACCGACCGC CGCGTACAAC AACGGCAAGC AGACTTTCAT CGTGCTTCCT ATCGGCACGG CGCTCCCAAC CGTATATGAG AAAACACCAG ATGGAACGGA GGTTCGAGTC GGAGCGCACA TGGATCACGA CATGATGGTG ATTCACGACG TGGCACGCAA ACTGGTTTTG CGCCGTGGCC GCCTTGTTGG CTGTCTGATC GACGGGCACT ACAACCCAAC CGGCCCCGAC CTCAATACCG AAACTGTCTC GCCAGACGTG AAGCGCGTCC TGAACACGCC TGGAGGTGCA CAACAATGA
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Protein sequence | MMRRSLRFIA LAVWAVCSGA HALTIPDSSP EDAHLQHAPL TDDIVAIQSE VGRMTVIRFG KGEVVQNYGM GDADAWAVVF SGNELDFVPK AQEADTNLRV ITNRRSYWFS VALKTNSFVT PSRDDDAQPT SRYKKTAGRP KTYLPTTWQL NIDYPPAEVA KIAAEDPAVK AAKTKHEIVS AFDQAKMEGR LDADYGYIGD DELLPTAAYN NGKQTFIVLP IGTALPTVYE KTPDGTEVRV GAHMDHDMMV IHDVARKLVL RRGRLVGCLI DGHYNPTGPD LNTETVSPDV KRVLNTPGGA QQ
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