Gene Bphyt_7351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7351 
Symbol 
ID6280696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010679 
Strand
Start bp79566 
End bp80474 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID642619530 
ProductConjugal transfer protein TrbG/VirB9/CagX 
Protein accessionYP_001893565 
Protein GI187921976 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02781] P-type conjugative transfer protein VirB9 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.280027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAC GTTCCCTACG GTTCATCGCG CTCGCGGTGT GGGCCGTGTG CTCGGGCGCG 
CATGCACTCA CCATTCCGGA TTCTTCGCCG GAAGACGCTC ATTTGCAGCA TGCCCCCCTA
ACTGATGACA TCGTAGCCAT CCAGTCGGAA GTAGGCCGCA TGACCGTCAT CCGCTTCGGC
AAGGGCGAAG TCGTGCAGAA CTACGGGATG GGCGATGCCG ATGCGTGGGC CGTTGTGTTT
TCGGGTAACG AACTCGACTT CGTGCCGAAG GCGCAAGAGG CAGACACGAA TCTGCGCGTC
ATCACGAACC GGCGCAGTTA CTGGTTTTCT GTTGCGCTGA AAACCAACAG CTTCGTTACG
CCCAGCCGCG ATGATGATGC ACAGCCGACG AGTCGCTACA AGAAGACGGC CGGGCGACCG
AAGACCTACC TGCCTACGAC GTGGCAGCTC AATATCGACT ATCCGCCGGC AGAAGTCGCG
AAGATCGCCG CCGAAGACCC TGCGGTGAAA GCGGCCAAGA CGAAGCACGA AATCGTTTCG
GCATTTGACC AGGCCAAGAT GGAAGGCCGT CTTGACGCCG ACTACGGTTA CATCGGAGAC
GATGAATTGC TACCGACCGC CGCGTACAAC AACGGCAAGC AGACTTTCAT CGTGCTTCCT
ATCGGCACGG CGCTCCCAAC CGTATATGAG AAAACACCAG ATGGAACGGA GGTTCGAGTC
GGAGCGCACA TGGATCACGA CATGATGGTG ATTCACGACG TGGCACGCAA ACTGGTTTTG
CGCCGTGGCC GCCTTGTTGG CTGTCTGATC GACGGGCACT ACAACCCAAC CGGCCCCGAC
CTCAATACCG AAACTGTCTC GCCAGACGTG AAGCGCGTCC TGAACACGCC TGGAGGTGCA
CAACAATGA
 
Protein sequence
MMRRSLRFIA LAVWAVCSGA HALTIPDSSP EDAHLQHAPL TDDIVAIQSE VGRMTVIRFG 
KGEVVQNYGM GDADAWAVVF SGNELDFVPK AQEADTNLRV ITNRRSYWFS VALKTNSFVT
PSRDDDAQPT SRYKKTAGRP KTYLPTTWQL NIDYPPAEVA KIAAEDPAVK AAKTKHEIVS
AFDQAKMEGR LDADYGYIGD DELLPTAAYN NGKQTFIVLP IGTALPTVYE KTPDGTEVRV
GAHMDHDMMV IHDVARKLVL RRGRLVGCLI DGHYNPTGPD LNTETVSPDV KRVLNTPGGA
QQ