Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7350 |
Symbol | |
ID | 6280695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010679 |
Strand | + |
Start bp | 78670 |
End bp | 79569 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642619529 |
Product | Type IV secretory pathway component VirB8 protein-like protein |
Protein accession | YP_001893564 |
Protein GI | 187921975 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.160326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGT TGAAGAGCGC CAAGACCCTG ACCGCCGAGG CGGCAGATTG GGATTCGCAT AACGCCGAAA AAGCTGAAAA GCGGCTGAAG CTATTGAAGC TGTGGGCCAT CAGTGCGACC GTCGTTGCGG TGGCGACAAC AATCTCTGTC GCCCCGCTGA TGCACTTCCA GCATCTGCAA GTGGCCGTCA TGGTCTTCGA CAAACTGACC CGCACGTACT ACATGCAGAA CGATGCAGTC CTCCATGACG ACGATCCCGA TTGGCAAATC CGTGCCGAGT CGGACCTTGC CCGCTATGTC AAGGCGCACG AGGGGTTCAC GCGCGGCGAA GCGGATCAGA ATTACAAGAC GGTATGGCTC ATGGACTCGC AGGATTTGCG CGCGTCGTGG GATCAATACT ATCGTCCTGA CCTTAATCCG AAGGGGTCTC CACTCTCCTT TATGCGGGCG TCCGACGCGT GGACGCTGAA GGACTATTCC TTCTCGTTCA TCCCGAGCAG CGAGCCGGAC ATTCATGTTG CGCAGGTGCG ATACACCTAC GTCAAGAAAG TCGGCATGAC ACCGCCGACG CAACAGCGAA TGGTATCGAC GGTCTCCTTC AAGTACACGA AGGAAAACCT GCCCAACAAC GTCGATGACC GCATGCTGAA TCCGGTCGGT TTCATGGCAA CGAACTACCA TCGCGACGAC GATGGTCCGA TTCAACCGTA TTCGGAAAGC GGCGCAGCGC CGACTTCCGC CTACCCGCCC GTGCAGACCG GAACGATGCC GGTACAGGGT GCGGGGTCGT ATGCGCAAGC CCAACCGCAG TCGGGTCAGG GCTATCAGGC TACGGTGATG AACCGCCTGC GGCAGATTAT GCCTGGCGGG AATCCGGCCA ATGGGGGAGG CGCACGATGA
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Protein sequence | MKTLKSAKTL TAEAADWDSH NAEKAEKRLK LLKLWAISAT VVAVATTISV APLMHFQHLQ VAVMVFDKLT RTYYMQNDAV LHDDDPDWQI RAESDLARYV KAHEGFTRGE ADQNYKTVWL MDSQDLRASW DQYYRPDLNP KGSPLSFMRA SDAWTLKDYS FSFIPSSEPD IHVAQVRYTY VKKVGMTPPT QQRMVSTVSF KYTKENLPNN VDDRMLNPVG FMATNYHRDD DGPIQPYSES GAAPTSAYPP VQTGTMPVQG AGSYAQAQPQ SGQGYQATVM NRLRQIMPGG NPANGGGAR
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