| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7350 |
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| Symbol | |
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| ID | 6280695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010679 |
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| Strand | + |
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| Start bp | 78670 |
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| End bp | 79569 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642619529 |
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| Product | Type IV secretory pathway component VirB8 protein-like protein |
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| Protein accession | YP_001893564 |
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| Protein GI | 187921975 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.160326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGT TGAAGAGCGC CAAGACCCTG ACCGCCGAGG CGGCAGATTG GGATTCGCAT
AACGCCGAAA AAGCTGAAAA GCGGCTGAAG CTATTGAAGC TGTGGGCCAT CAGTGCGACC
GTCGTTGCGG TGGCGACAAC AATCTCTGTC GCCCCGCTGA TGCACTTCCA GCATCTGCAA
GTGGCCGTCA TGGTCTTCGA CAAACTGACC CGCACGTACT ACATGCAGAA CGATGCAGTC
CTCCATGACG ACGATCCCGA TTGGCAAATC CGTGCCGAGT CGGACCTTGC CCGCTATGTC
AAGGCGCACG AGGGGTTCAC GCGCGGCGAA GCGGATCAGA ATTACAAGAC GGTATGGCTC
ATGGACTCGC AGGATTTGCG CGCGTCGTGG GATCAATACT ATCGTCCTGA CCTTAATCCG
AAGGGGTCTC CACTCTCCTT TATGCGGGCG TCCGACGCGT GGACGCTGAA GGACTATTCC
TTCTCGTTCA TCCCGAGCAG CGAGCCGGAC ATTCATGTTG CGCAGGTGCG ATACACCTAC
GTCAAGAAAG TCGGCATGAC ACCGCCGACG CAACAGCGAA TGGTATCGAC GGTCTCCTTC
AAGTACACGA AGGAAAACCT GCCCAACAAC GTCGATGACC GCATGCTGAA TCCGGTCGGT
TTCATGGCAA CGAACTACCA TCGCGACGAC GATGGTCCGA TTCAACCGTA TTCGGAAAGC
GGCGCAGCGC CGACTTCCGC CTACCCGCCC GTGCAGACCG GAACGATGCC GGTACAGGGT
GCGGGGTCGT ATGCGCAAGC CCAACCGCAG TCGGGTCAGG GCTATCAGGC TACGGTGATG
AACCGCCTGC GGCAGATTAT GCCTGGCGGG AATCCGGCCA ATGGGGGAGG CGCACGATGA
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| Protein sequence | MKTLKSAKTL TAEAADWDSH NAEKAEKRLK LLKLWAISAT VVAVATTISV APLMHFQHLQ
VAVMVFDKLT RTYYMQNDAV LHDDDPDWQI RAESDLARYV KAHEGFTRGE ADQNYKTVWL
MDSQDLRASW DQYYRPDLNP KGSPLSFMRA SDAWTLKDYS FSFIPSSEPD IHVAQVRYTY
VKKVGMTPPT QQRMVSTVSF KYTKENLPNN VDDRMLNPVG FMATNYHRDD DGPIQPYSES
GAAPTSAYPP VQTGTMPVQG AGSYAQAQPQ SGQGYQATVM NRLRQIMPGG NPANGGGAR
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