Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7338 |
Symbol | |
ID | 6280678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010679 |
Strand | - |
Start bp | 63088 |
End bp | 63843 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642619517 |
Product | hypothetical protein |
Protein accession | YP_001893552 |
Protein GI | 187921963 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000613796 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00990107 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGCACG CAAAAATCGC CGTAATCAAT CTGAGTGGTA ATGTTGGCAA AACGACGCTC GCGACGAACT GGCTGAAAGC TAGTCGGCCG GAAGCAAAAC TGGTTTCGGT TGAGCATTAC AATGCGTCCG TTGCCACGCA AATCACAAGC GCGCAGGCAC AAGAGTTTTC CGCGTCGCAA TTCCGGGATA TTTTCAACGA ACTTCTCATG AGCGATGAGG TCATTATCGA CGTTGGCGCG TCGAACGTGA TCGCGTTCAT GGAAGAACTG TCGCGGTATA AATCGGCGGT TCGCGAGTTG GATATGATCG TGGTTCCGAC TGTGCCGGCT GAGAAGCAAC AGAAAGACAC GGTGAAAACG GTCGAGTGGC TGTCAAAACT CGGATTCAGT AACGATAAAA TCCGCGTCGT TTTCAATATG TACGATGGCG GCGAATCGCA ACTTCCGCCG AGCTACGTGT ATCAGCTCAT TCACGATTAT GCGGCTTCAA CTGGCAAGGG TAAGGCTACA TTCGAGCCGG CCATTGTCAT CCCGTTCAAC GAAGTTTTCG ATCTGGTCAC GAATAAGAAC ATTCGCGAGC TGGCCGAAGA CCGGACGGAC TGGAAGGCGA AACGGACTGA AGCGAAACAG GCTGGCGATG TGGCCGCCCT CGAAGCAGCG GTGATTGCGG AAGGCGACCG CGATCTGGCG ATTACCGCTC AAGAGGCATT GGCGAGCGCG AGCGACATTC TGTTCGGCAA GGCGGCGAAA AAATGA
|
Protein sequence | MKHAKIAVIN LSGNVGKTTL ATNWLKASRP EAKLVSVEHY NASVATQITS AQAQEFSASQ FRDIFNELLM SDEVIIDVGA SNVIAFMEEL SRYKSAVREL DMIVVPTVPA EKQQKDTVKT VEWLSKLGFS NDKIRVVFNM YDGGESQLPP SYVYQLIHDY AASTGKGKAT FEPAIVIPFN EVFDLVTNKN IRELAEDRTD WKAKRTEAKQ AGDVAALEAA VIAEGDRDLA ITAQEALASA SDILFGKAAK K
|
| |