Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7276 |
Symbol | |
ID | 6280603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010679 |
Strand | - |
Start bp | 30229 |
End bp | 31026 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642619455 |
Product | hypothetical protein |
Protein accession | YP_001893490 |
Protein GI | 187921901 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000010313 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00519152 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGATTGA AAGTTTCGCG GCTCGCGATG GCGGTGTGTT GTGCTGCGGG CATGGTGACG GGGCTGCTCT GCGTAGCAGG GCCGGCGGTC GCGCAACAGG CGTCATGGGA TGACGGGCAA GACGATACGC CGATGAAACC AGTTGTAGAC GGGCAGACAT CCGGCGGAAC GTCGGCATTC GAATCTGCGG CGGCCCCGCT AGCGGCGTCA GCATCGGTTC CGTACAAGCA CTATTCCAAC AATCGGCAAA CTAACGCGAG ACTGAACGCA GTCTTCGACA TCATTGCGAC GCAAGGGGAC GGGCTCGTGT GGGACAGCGA GCATCACCTT GTGCAACCGA AGACGCCTGT CGGTAATGCC GCCGAAGGCG GGGCAGGTGC GGCGGGCGTG AAAACCGCAG CGGTGTCCGC ACCGAAAGTC AAAACGGCCG CCGTGGGCGG GCCGGCCAGC GCGGCGCTTG CCGCGTCTTC CGCGACAACA ACGGTAGCGA GCGCGGCAGC GCCCATCGTT GCGTCAACGC CATCGACGCC GAGTGCGCCG CCGGCTCCTG TGCCGCAAAC GTGGGCTTTT GCTGCGAGCG GATCGTTACA GGAGACGTTG ATTTCATGGG CACGACAAGC GGGCTGGGAA ACGCCGGCTT GGCAGGCGTC GCAGCCGTAC ACCATCATGA GCACCCAGCC GATTACCGGG ACGTTCCTCG ATGCCGTCAA AGCCATCGCG ACGGCCGAAC CGGGTCTCGA CATAAACGTG TCGATGACGA AGCGGACACT AAAAATTGTC GATCACAAAG GAATATAG
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Protein sequence | MGLKVSRLAM AVCCAAGMVT GLLCVAGPAV AQQASWDDGQ DDTPMKPVVD GQTSGGTSAF ESAAAPLAAS ASVPYKHYSN NRQTNARLNA VFDIIATQGD GLVWDSEHHL VQPKTPVGNA AEGGAGAAGV KTAAVSAPKV KTAAVGGPAS AALAASSATT TVASAAAPIV ASTPSTPSAP PAPVPQTWAF AASGSLQETL ISWARQAGWE TPAWQASQPY TIMSTQPITG TFLDAVKAIA TAEPGLDINV SMTKRTLKIV DHKGI
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