Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_7271 |
Symbol | |
ID | 6280647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010679 |
Strand | + |
Start bp | 25549 |
End bp | 27171 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642619450 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001893485 |
Protein GI | 187921896 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.839285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCGCGA CAGTTTCTTC ACATGAAAGC AAGAGCTGGC GGTACCTCGC GACATTGTGG ACTGGAGGCT GCATCGCGCT CGGAGCCGTT ACCGCAGCCT GTGTCCTGTG GGACCAGGAA CTGGGCACTG CCGGCTTCTG TCTTCTCGTT GTCGTTGTTC TTCTGTCGCT GCTGGACAAC TTCATTTCAT CCGCGCTTTT CTCGGTCATT GGCGCGATGC TCCTCGGGTA TTTTTTCACG GAACCGGTCC ATAGCATCCA CGTTAGCAAA CCCCGGGATT TATTCTCCCT GCTTGCCTTT CTCGTCACGT CGATCGCAAT TACTACCTTT GTCAGGCGAA TTCGTCGCGT GGAGAAAACG CAGCGCGCTC AGGCGCAGTT GCTGGAACTG ACTCACGACA TCATCATCGT ACGCGATAAG GACGACGTGA TTACGTACTG GAATCAGGCG GCGGAAATAC TCTATGGATG GACCAAGGAA GAGGCGATTG GCGAGTTCAT CGACGAACTT CTGAGTTCGG TGTTCCCCCT GCCCCGTGAC CAGCTCCAGC GGATTTTTCA TCGCGACGGT CAGTGGGAGG GCGAGCTGAT TCACACGAGG CGGGATGGCA CCAAAATAAT CGTGACGAGC CGTTGGGCAC TACAGCGCGA CAGCGCGGGC AATCCCTTAG CCACACTTGA GACCAATAAT GACATCACGC AGCGCAGGCA CGCCGAGGAC CTGCTGCGAA AGAGTCAGGC GCAATATTTC GCCGAAGCGC AGAAACTGAG CAGGACCGGA AGCTTTGGAT GGAACATTTC GAGCGGCGAA CTCTTCTGGT CCGACGAGAC TTTTTCCATC TTCGAATACG ACTTGGCCGT CGCGCCCAAC ATCGAGTTGG TCCGGCAGCG CGTATATCCA GACGATCTCC CCCTGTTCGA CGAGAAGATT GCAAGGGCGC GTGGTTTCAC TGTCGACTTT GACATCGAGC ATCGTCTGCT TTTTCCTGAT GGACGCATCA AGCACCTCCA TGTGGTGGGC AGGTCAGCGA GCGGTCAGCC GGATAACCGG GCGTTCATCG GAGCGGTAAT GGACGTGACC GGCGCGAAAC AAACGGAGGA GCAGTTACGG CATACGCAAA GCGAACTTGA ACGCGTAAGC CGGATAACGG CGCTGGGCGA GCTGAGTGCG TCAATTGCTC ACGAAGTAGG ACAGCCCCTC GCCGCCATCG TCACGAGCGG TGAAGCATGT CTGCGCTGGC TGCATCGCCA GCCACCGAAC ATGGAAGAAA TAGAGGGTTG CGTGAGTCAC ATGACAGACC AGGGCAATCG CGCCGCAGCG ATCGTGCAAC GTGTGCGGGC ACTCATGAAG GGGGCGCCGC CGGACCGGGC ACCAATCGCA ATCAACGACG TGATTGGCAA GGCGATCAAT TCACACACGT CACCCAAAAA TCAACGTCGG CATTACCGTT CCAAATCTGG CTCGTGGCAT TCCAATCGTA CTGCCCGTTT CCATTCGGGC CAGCAGCGGG CCATACGTGA TTTATGCCGC CCTCCGGGTA TCCAGAAGAT CCCGCCACGA AGCAGAACGA GTGCCATCCC AAATCCGGCG ATGTCGATTG GGACACGTCA TACAAGGCGC TGA
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Protein sequence | MRATVSSHES KSWRYLATLW TGGCIALGAV TAACVLWDQE LGTAGFCLLV VVVLLSLLDN FISSALFSVI GAMLLGYFFT EPVHSIHVSK PRDLFSLLAF LVTSIAITTF VRRIRRVEKT QRAQAQLLEL THDIIIVRDK DDVITYWNQA AEILYGWTKE EAIGEFIDEL LSSVFPLPRD QLQRIFHRDG QWEGELIHTR RDGTKIIVTS RWALQRDSAG NPLATLETNN DITQRRHAED LLRKSQAQYF AEAQKLSRTG SFGWNISSGE LFWSDETFSI FEYDLAVAPN IELVRQRVYP DDLPLFDEKI ARARGFTVDF DIEHRLLFPD GRIKHLHVVG RSASGQPDNR AFIGAVMDVT GAKQTEEQLR HTQSELERVS RITALGELSA SIAHEVGQPL AAIVTSGEAC LRWLHRQPPN MEEIEGCVSH MTDQGNRAAA IVQRVRALMK GAPPDRAPIA INDVIGKAIN SHTSPKNQRR HYRSKSGSWH SNRTARFHSG QQRAIRDLCR PPGIQKIPPR SRTSAIPNPA MSIGTRHTRR
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