| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_7243 |
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| Symbol | |
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| ID | 6280713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010679 |
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| Strand | + |
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| Start bp | 605 |
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| End bp | 2401 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642619423 |
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| Product | hypothetical protein |
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| Protein accession | YP_001893458 |
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| Protein GI | 187921869 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02520] type IVB pilus formation outer membrane protein, R64 PilN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTA TCCGTCTTGC CCTGATTCCC GCCCTCGCAG CGGCTTCCCT CACCGGCTGT
ATCGACCCGC AACTTTCGAA AGGCATTCCA AAGGCCGCGA ATGAACAGAC CGACGCGGCC
AAACAGTTGT CCGATCGCGT AGTCCAGCAA ATCGACAACG CGCGTGAAGT GCGCCGCCGT
AACGCGTTCG TGGATCATCC CTATCTCGCG GGAAAAAGCG TTGCACTATC GCCCACCGCG
AACCTTCCGC TGGCTCTGCG CAAGGACGTG AAAACCGCCC TGATGTTTCC GGGCAAGCGC
GTCAAGCTCG CCGTCGCGGC CGAACAGATC AATCTCGCGA CCGGCATTAA CGTCGTGATT
TCGCCCGACG TCTATCTGCC GCAAGCAGCC CTGCTCCCGC GCGCGCAAAA GCTCGATGAC
GCAGGTAGCA GCGGTGCCGC CGCGCCGGGC GCAATCCCGT CTGCCGCTCC GGTCGGAGGC
GGTCGCATTG CGGCCGGCCC TCTGCCCCCG CTCGATAGTG CTGTCGGCAG TGGTGGTGGT
CTGGTCTCGG CCAGCTATAC CGCTACGCCG TCCCTCGATA CACCCGACGA CGTGGATATC
CAGCGGGACG AAATGCCGCT CTCTCAATCG CTCGACCTGA TTTCAAGCCG GCTCGGCGTC
AACTGGTCCT ACGACTCGAA GAAGGGCGTC ATCCGTATTT ACCGGATGCA GACAAAAACC
TGGGCATTGC CGGTCAAGCC GGGCTCTATG TCGTACAACA CGCAGTTCGA CACCAGTACG
GCGCAGTCCA ACAACCCGAA CGCCCTGAAC GGCGTCAACG AAAAGAACGC GAACAAGTCG
GAAGCAACCA ACGTCAACGA AATGACAGCG ATGCTCAACG ATATCCAGAC GGTCATGACC
CGCTCCGGCT CCGTGTCGGG CAACGTCGCG GATGGCACTA TCACGCTCAC CGACACCAAA
GACGCTGTTG ACCGCGCAGA GGGAATCATC AATTTCCATC GCGCACTGCT GAACAAGCTC
GTTTCCTACC ATATCCGCGT CGTGCAAATC ACGCGCAGCA ATGCAGGGCA GCTCGGCGTC
GACTGGCAAG CGCTGCTGAC GAAAGCACTA AACAACGTGC CGGGCTTCAT CATTTCGAGC
ACGTCTCCCC TGACGTTGAC CACGGCCGCC GCCGGTTCAC TTACCACGAA AATCACTTCC
GGCCAGTTCA GCGGAACGCA GGCTGTTGTC AATGCCATCG CGCAGCTTGG CTACACCGTG
AGCACGGATG ACATTCCGAT GCAGGTACAG AATCGCCACT CCGGCTATTA CGACAACGTA
AACCAGTTCT CCTATGTTTC GCAGACGACG CCGGCCGCGT CCACTGTCGG CGGAACTGGC
GGCACGCCGG GCATTACGAC CTCGATGGAC TCCGTTGGTC TGAAGTTCCT GATCTACGGA
ACCGTGACGG ACGACAACAA CATTTCGATT AGCGTCTCGA TGGACAACTC GGCGCTGAAC
GGCCCTATCC AGACTTTCAC ATCGGGGCAA GGCGCGAATC AGCAGTCCGT TCAGGAAGTC
GACAAGAACA AGTACGGTGC GTCGACCGAT GGCATCGTGC GCAACGGCGG CATCATCGTT
CTTGCCGCTC ACGACCGCAC TCAATTGCAG TCGCAGCGTA GCGCGCTCGG GTACAAGATT
CCGATGCTTG CGGGGGGCTC CGTCAACGAT AGCGACTCGC GTACCACTAC GCTTTTCGTC
ATCAGCGCGT CGATCCGCGA CATGGGTGCC GGCCAGTCCG ATAACCGGGG ACTCTGA
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| Protein sequence | MKAIRLALIP ALAAASLTGC IDPQLSKGIP KAANEQTDAA KQLSDRVVQQ IDNAREVRRR
NAFVDHPYLA GKSVALSPTA NLPLALRKDV KTALMFPGKR VKLAVAAEQI NLATGINVVI
SPDVYLPQAA LLPRAQKLDD AGSSGAAAPG AIPSAAPVGG GRIAAGPLPP LDSAVGSGGG
LVSASYTATP SLDTPDDVDI QRDEMPLSQS LDLISSRLGV NWSYDSKKGV IRIYRMQTKT
WALPVKPGSM SYNTQFDTST AQSNNPNALN GVNEKNANKS EATNVNEMTA MLNDIQTVMT
RSGSVSGNVA DGTITLTDTK DAVDRAEGII NFHRALLNKL VSYHIRVVQI TRSNAGQLGV
DWQALLTKAL NNVPGFIISS TSPLTLTTAA AGSLTTKITS GQFSGTQAVV NAIAQLGYTV
STDDIPMQVQ NRHSGYYDNV NQFSYVSQTT PAASTVGGTG GTPGITTSMD SVGLKFLIYG
TVTDDNNISI SVSMDNSALN GPIQTFTSGQ GANQQSVQEV DKNKYGASTD GIVRNGGIIV
LAAHDRTQLQ SQRSALGYKI PMLAGGSVND SDSRTTTLFV ISASIRDMGA GQSDNRGL
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