| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4947 |
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| Symbol | |
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| ID | 6285078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1301274 |
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| End bp | 1302209 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642619421 |
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| Product | malonate decarboxylase, epsilon subunit |
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| Protein accession | YP_001893456 |
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| Protein GI | 187927111 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
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| TIGRFAM ID | [TIGR03131] malonate decarboxylase, epsilon subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.300822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.084962 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTGC TCTTCATGTT TCCTGGCCAG GGGAGCCAAC GCGTGGGCAT GCTGCATACG
CTGCCTGACG ACCCGGCCGT GGCACAAACA TTGAGCGAGG CGGGCGACGT GCTGAGCGTC
GATCCGCTCA CGCTCGACAC CGCAGAGGCA TTGCGGTCGA CCGTGGCCGT GCAGCTCTGC
CTGTTGATTG CCGGTGTGGC TGTGGCACGC ACGTTGGTTC GGCAGGATGC GGGGCCGGAC
ATGGTGGCGG GCCTGTCGAT TGGCGCGTGG CCTGCAGCAG TCATTGCAGG CGTGCTGGAA
TTCAGCGATG CGCTGTGTCT GGTATGCCTG CGCGGGCAAC TCATGGAAGA CGCGTACCCC
AGCGGCTACG GCATGGCCGT CACGGCCGGA CTGACTGAAC CCGAGGTTGC CGCCATCGTG
GCGCAGGTCA ACTCGGCCGC AACGCCAGCC TATGTCGCCA ACCTGAATGC GGAACGGCAG
ATTGTCGTGG CGGGTAGCGA TGCGGCGCTC ACGCAAGTCA TGACGCGCGC GCATGCGGCG
GGCGCATCGA CGGCAACGCG GCTGTGCATG GCAGTGCCGT CGCACTGTCC TCTACTTGAC
GCACAGGCTG CCGAGCTGGC TACCGCCGCC GCAAAGGCCA CGGCCCACCC GCCACAACTC
ACCTACGTCA GCAGCAGCCG GGCGCGTGCG CTATTCCGCG CAAACCTCAT CGTTGAAGAC
CTGGCTTGGA ACATGGCCCG GCCAGTGCTG TGGCATGACT CGCTGCGGCA TGCGCTTGAG
CGCGGCGCAC GGATGGCCGT GGAGATTGCG GGCAACGGTG CGCTGATGCG CCTCGCACAG
CCCGTCTTTG CAAATGACGC GGTGCTGGAT GCGAGCAGTG GGCTCGATGC GGTGCGGGTG
CGGATACAAC GCCAGCGGCG TTTGGACAGC CGATAG
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| Protein sequence | MSVLFMFPGQ GSQRVGMLHT LPDDPAVAQT LSEAGDVLSV DPLTLDTAEA LRSTVAVQLC
LLIAGVAVAR TLVRQDAGPD MVAGLSIGAW PAAVIAGVLE FSDALCLVCL RGQLMEDAYP
SGYGMAVTAG LTEPEVAAIV AQVNSAATPA YVANLNAERQ IVVAGSDAAL TQVMTRAHAA
GASTATRLCM AVPSHCPLLD AQAAELATAA AKATAHPPQL TYVSSSRARA LFRANLIVED
LAWNMARPVL WHDSLRHALE RGARMAVEIA GNGALMRLAQ PVFANDAVLD ASSGLDAVRV
RIQRQRRLDS R
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