Gene Rpic_4946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4946 
Symbol 
ID6285866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1300642 
End bp1301277 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID642619420 
Productphosphoribosyl-dephospho-CoA transferase 
Protein accessionYP_001893455 
Protein GI187927110 
COG category 
COG ID 
TIGRFAM ID[TIGR03135] holo-ACP synthase, malonate decarboxylase-specific 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.11637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCA CGCCGCTGCG CGCGCACGAT CTGCTGTGGG TGTCGGAGAC ACCCGTGGCG 
ACGGACGACG CGCCATTGCC GGACTGGGCC ATCACGGCGT GCCGGCAAGG CTCGCCAGTC
GTTGTGCGCC GGGCCCCGCG CGGCAACGAT GGTGCAGTGC CGGTCGGCCT GCGCGGGGGT
GCGCGGCATG AACGCTGCGC AGCGACGGTG TCTGCCAGCA GCATCACGCG TGTGGTCTCG
CCCGAGGCGC TGGCCGCCAC AACGGCCTCC ATCGCACCCG ACGCGCCGTT TGCGGCACTG
CGCACCTTGC GTGCGCTTGC AACAAAATTC GACGCGCTTG GCTGGGCGTG GGGCCCGACC
GGCGGTGCGG GCTTCGCGCT CGCCAGTGGC TTGCCGGTGC TGCATGCGGA TAGCGATCTC
GATCTCGTGC TGCGCATGCC GCATGCACCG TCGGCCGCGC AGCGCAATCA GCTCGTGCAC
GTGCTGGCCG AAACCGAATG CCGCGTCGAC CTGCAGATCG ACACCGCGCG CGGTGGATTC
GCGTGGCGCG ATTGGCTAGC GTCGCCGCAT CAAACGTTGC TCAAGACCGA TCACGGCCCA
CACCTCGTTG CAGATCCGTG GAGCGAATGC GCATGA
 
Protein sequence
MTPTPLRAHD LLWVSETPVA TDDAPLPDWA ITACRQGSPV VVRRAPRGND GAVPVGLRGG 
ARHERCAATV SASSITRVVS PEALAATTAS IAPDAPFAAL RTLRALATKF DALGWAWGPT
GGAGFALASG LPVLHADSDL DLVLRMPHAP SAAQRNQLVH VLAETECRVD LQIDTARGGF
AWRDWLASPH QTLLKTDHGP HLVADPWSEC A