| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4934 |
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| Symbol | |
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| ID | 6285849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1286296 |
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| End bp | 1287771 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642619408 |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_001893443 |
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| Protein GI | 187927098 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.224199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC GACTGTTTGT TGCCACGACA CTTGCCGCAG CGGCGATCAC GTGCGCCGCG
AGCGCCAGCG CCGGGCAGGC ACCCGCATCC CTCGCATCAC CGGACATTCC CATCAGCCAT
CGGGATCGCG TCTATGCGGC TGAGCAATTC TCGAACACGG TGTCCGTCAC GGACCCCGCC
AGCAACACGC TCCTGGGTGT GATCAAGCTG GGCGATCCTG CACCGGGCAA CTTCAGCCCG
CTCTACCGCG GACAGGTGCT GGTGCATGGC ATGGGATTCT CGCCAGATCA CCGGACGTTG
GCGGTGGTCT CGATCGGTTC CAACTCGGTC ACGTTCATCG ACACGCAGAC CAACGCGGTC
AAACACACGA CGTATGTGGG CCGCTCGCCT CACGAGGCGT TTTACACGCC GGATGGCAGC
GAGGTCTGGG TGACCGTGCG CGGCGAGAAC TACATCGCGG TGCTGGACGC CAGCACCTAT
GCGGAGAAGA CGCGTATCAC CGTACCGGCG GGCCCCGGCA TGCAGATCTT TTCGCCGGAC
GGCAAGTACG GCTACGTGTG CTCGTCGTTC AATCCGGAAA CGGTGGTGAT CTCGACGGCG
GATCACAAGA TCGTGGGACA CATCAAGCAG GAATCGCCGT TCTGTCCCAA CATTGCAGCC
ACGCCGGATG GCAAGCAGGT GTGGCTCACA TTGAAGGACA TCGGCAAGGT GCAGGTGTTC
AGCGCCGAGC CACCGTTCAA CCCGATCACC TCGTTCGACA CCGGCCCCAT CACGAATCAC
GTCAACTTCG CGCATCACAC CAAGGGGACG TTTGCCTACG TGACGATTGG CGGCACGAAC
CAGGTCAAGG TCTTCCGGAC AGACAATTTC GAACAGGTCG CGACGATTCC CGTCGGCAAA
CTTCCGCACG GTCTATGGCC TTCCGGCGAC GGCACACGCA TCTACGTCGG CCTGGAGAAT
GACGACGCGC TGGCTGTCAT CGACACATTG ACGAACAAGG TCGTGTCTAC CGTTCGGATC
GGCCAGGCAC CGCAGGCGCT GACGTACGTG CCGAACGCTG TGCCCAAGGG CGACGGCACG
ACGAATCTGC AGCCGCTCGG CATGGCAGGG CAAGTCAGCC ATCTTGCGCT CGTGCCGGCA
GGCGCAGACA AGGCAGACGC AATGGCCGTA CCCACCAGCG TGGCGCTGTT CGATCAAGGT
CTCGTTCAGG TACTCCAGGC ATCGGTGACC GGGCTGCAGC CGAAGCAGCC CTACGCGCTT
GCCTTGTCAC AACATGCAGA TGGCAGCGGA CCGCTTGAGC GCCTGGCGAG CTTCATGTCC
AACCCGGCCG GGGGCGCCAT CGTCAACTCC ATCGGACAGA TTCGTCAGGT GGTCACGCCT
GCCAACGCCG ACGCTGACAA CACGCGCCGG TATCTTGTGA TTGCACCGGT GGTGTCCGGC
AAGCTGGGCA GTGCGGTCCA GGTTCAAGCG CGCTAG
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| Protein sequence | MKNRLFVATT LAAAAITCAA SASAGQAPAS LASPDIPISH RDRVYAAEQF SNTVSVTDPA
SNTLLGVIKL GDPAPGNFSP LYRGQVLVHG MGFSPDHRTL AVVSIGSNSV TFIDTQTNAV
KHTTYVGRSP HEAFYTPDGS EVWVTVRGEN YIAVLDASTY AEKTRITVPA GPGMQIFSPD
GKYGYVCSSF NPETVVISTA DHKIVGHIKQ ESPFCPNIAA TPDGKQVWLT LKDIGKVQVF
SAEPPFNPIT SFDTGPITNH VNFAHHTKGT FAYVTIGGTN QVKVFRTDNF EQVATIPVGK
LPHGLWPSGD GTRIYVGLEN DDALAVIDTL TNKVVSTVRI GQAPQALTYV PNAVPKGDGT
TNLQPLGMAG QVSHLALVPA GADKADAMAV PTSVALFDQG LVQVLQASVT GLQPKQPYAL
ALSQHADGSG PLERLASFMS NPAGGAIVNS IGQIRQVVTP ANADADNTRR YLVIAPVVSG
KLGSAVQVQA R
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