| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4914 |
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| Symbol | |
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| ID | 6285824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1265498 |
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| End bp | 1267045 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642619390 |
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| Product | xylose transporter ATP-binding subunit |
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| Protein accession | YP_001893425 |
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| Protein GI | 187927080 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | [TIGR02633] D-xylose ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00466146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTA ACGGCACCCT GTTCGAGATG CGCAACATCG TGAAGTCGTT CTCCGGTGTG
CGCGCGCTCG ACGGCGTCAG CCTGGCAGTC AAGCCAGGCG AATGCGTCGG TCTGTGCGGG
GAGAACGGCG CCGGGAAATC GACCCTCATG AAGGTGCTGT CGGGGGTCTA TCCCTACGGC
ACCTTCGAAG GCGACATCCT GTGGGAAGGT GAACCGCTGC GCGCGCACTC GGTGCGCGAC
AGCGAGCGCG CCGGCATCGT CATCATTCAC CAGGAACTGA TGCTGGTGCA GCAGCTCTCC
GTCACGGAAA ACATCTTCCT CGGCAACGAG ATCACCAAGC CGGGGGGCCG CATGGACTAT
GACGCCATGC ACGCCAAGGC CGAAGAACTG CTCGCCCGCC TGCGCCTGAC CGACGTGAAC
GTGGCTGCGC CCGTGATGAA CTACGGCAGC GGCCACCAGC AGTTGTTCGA GATCGCCAAG
GCGCTCGCCA AGAACGCGCG CCTGCTGATC CTCGACGAGC CGACCTCGTC GTTGAGCGCC
AAGGAAATCG AGGTGTTGCT GTCCATCATC GAAGACCTCA AGCGCAGCGG CGTGGCCTGC
GTCTATATCT CGCACAAGCT CGATGAAGTG AAGCGCGTGT GCGACACGAT CACGGTCATC
CGCGACGGCA AGCACATCGG CACGCGTCCC GCCGCCGACA TGACCATCGA CAACATCATC
ACCATGATGG TCGGCCGCGA GATGACATCG CTCTTTCCCA AGGTGGAGCA CACCGTGGGC
GAAGTCGTGA TGGAAGCGCG CAACGTCACC TGCTGGGACG TCACCAACCC CAACCGGAAA
CGCGCCGACG ACGTGAGTTT CGCCGTACGC CGCGGCGAGA TTCTCGGCAT TGCCGGGCTG
GTCGGCGCCG GGCGCACGGA GATGGTGTCC GCGCTGTTCG GCGCGTATCC CGGCCGCTCG
ACGGCCGAGA TCAAGGTCGA AGGCAAGCCC GTCAAGGTGA GCTCCCCCGC GCAAGCGATC
GCCAACGGCA TCTGCCTGGT GCCCGAAGAC CGCAAGCGCC ACGGCATCGT GCCGCTGATG
GGCGTGGGCG AGAACATCAC GCTCGCCACG CTGGCGCAGT ACGCGCGCGG CATGCGCGTC
GACAAGGGCG CCGAACTCAC CACCGTCGAC CGCGAGATCA AGCGCCTGCG CATCAAGACC
GCCAGCCCGG CGCTGTCGAT CGCCAGCCTC TCGGGCGGCA ACCAGCAGAA GGCCGTCGTC
ACGAAGATGG TGCTGGCGAT GCCGAAGGTG CTGATCCTCG ACGAACCCAC GCGTGGCGTG
GACGTGGGCT CGAAGTACGA CATCTACAAG ATGATTGCCG ATCTGGCCGC CAGCGGTGTG
GCAATCATCA TGGTCTCTTC CGAGATGCCG GAAATCCTGG GCATGAGCGA TCGTGTCCTG
GTCATGGGCG AGGGCCAGTT ACGTGGCGAC TTCGTCAACC AAGGCCTGAC CCAGGAGCGC
ATCCTGGCTG CAGCAATCAA TGCCGATCCG CAGCTCCGCG CTGCCTGA
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| Protein sequence | MSSNGTLFEM RNIVKSFSGV RALDGVSLAV KPGECVGLCG ENGAGKSTLM KVLSGVYPYG
TFEGDILWEG EPLRAHSVRD SERAGIVIIH QELMLVQQLS VTENIFLGNE ITKPGGRMDY
DAMHAKAEEL LARLRLTDVN VAAPVMNYGS GHQQLFEIAK ALAKNARLLI LDEPTSSLSA
KEIEVLLSII EDLKRSGVAC VYISHKLDEV KRVCDTITVI RDGKHIGTRP AADMTIDNII
TMMVGREMTS LFPKVEHTVG EVVMEARNVT CWDVTNPNRK RADDVSFAVR RGEILGIAGL
VGAGRTEMVS ALFGAYPGRS TAEIKVEGKP VKVSSPAQAI ANGICLVPED RKRHGIVPLM
GVGENITLAT LAQYARGMRV DKGAELTTVD REIKRLRIKT ASPALSIASL SGGNQQKAVV
TKMVLAMPKV LILDEPTRGV DVGSKYDIYK MIADLAASGV AIIMVSSEMP EILGMSDRVL
VMGEGQLRGD FVNQGLTQER ILAAAINADP QLRAA
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