Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4908 |
Symbol | |
ID | 6285812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1259915 |
End bp | 1261114 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619384 |
Product | branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | YP_001893419 |
Protein GI | 187927074 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATCGTC GAGACTTGCT CAAACTGGCG GCGCTGTCCG CCGTGCCCGC CTCGCTGCTG CAGGCCCGTT CTGCGTGGGC GGCCGATGCC ATCGAACTGG GCTGCCCGGT GCCGATGTCC GGTCCGTTTG CCGCCAACGG CAAGTTTGCC GACCTCGGCA TGAAGCTGGC CGTGGAGCAA TACGGCAAGG TGCTCGGCCG GCCGCTGGCG TATAGCGTGC TCGACACCGA AGGCAAGCCG GCCACGGCCG TGCGCAAGGT GCAGGAACTC GCGCAGCAGA AGAATGCGCG CTACTTCGCG GGCGGCATCC TGTCGTCCGA ATCGCTGGCG ATGGGCAAGG AGGCGGAGAA GTTTGGCGGC GTGTTCATCA CCACCGCAGG GGCCGATGAA ATTACCGGCA AGGACTGCAA CCGCGCGACC TTCCGCTGGT CGGTGCCCAC ATACGGCGCC ATCGAGCGCA CCGTGCGCCC GCTGATCGAA TCGATGCCCA AGGCCAAGCG CTGGTACACC ATCACGCCGC AATACGTGTT TGGCGACGGG TTGCTCTCGG CGGCCAAGAA CATCTTCAAG GAAAAGGGCA TCGAGCATGT GGGCAACAGC TACCACGCGC TCACCGAGAA GGAATTCAGC GGTTACCTGA CCAACGCGAT GGCCGCCAAG CCCGATGTGC TGCTGATCCT GAACTTCGGC TCGCAGTCGT CCGACACGCT GCGCCAGGCG GTGAGCTTCG GCATGAAGAA GAACACGACG ATCCTGGTGG CGTGGGCGTC TGGCCTGGAG CAGTTCGAAT CGCTCGGCGC CGACCTGTGC GATGGCGTGT ACTTTGGCGC GCAGTACTGG CACGACGTGG ATACGCCCGC CAACCACGAT CTGGTGAAGC GCACGCAGGC TGCGTTCAAG TCCAACCCGA ACTACAGCCT CGCGGGCTCG TACACCTGCA CGAAGATCCT GCTCGACGCG ATGGTCAAGG CCGGCAGCGT CGACCCGAAG GCTGTGATTG CCGCGCTGCA GGGCATGAAG TACGACGGCC TGACGGGCCC CGAAGAGATT CGCGCGGCTG ACCACCAGGT GCTCAAGAAC TACTACCTGC TCAAGGGCAA GCCCAAGAAC CGCATGAAGG ACAAGGACGA CTTTGCCGAA GTGGTGTCGG TGGGCAAAGC CTTCCTGCCG GTCGAACAGA CGCAGTGCAA GCTGACCTGA
|
Protein sequence | MNRRDLLKLA ALSAVPASLL QARSAWAADA IELGCPVPMS GPFAANGKFA DLGMKLAVEQ YGKVLGRPLA YSVLDTEGKP ATAVRKVQEL AQQKNARYFA GGILSSESLA MGKEAEKFGG VFITTAGADE ITGKDCNRAT FRWSVPTYGA IERTVRPLIE SMPKAKRWYT ITPQYVFGDG LLSAAKNIFK EKGIEHVGNS YHALTEKEFS GYLTNAMAAK PDVLLILNFG SQSSDTLRQA VSFGMKKNTT ILVAWASGLE QFESLGADLC DGVYFGAQYW HDVDTPANHD LVKRTQAAFK SNPNYSLAGS YTCTKILLDA MVKAGSVDPK AVIAALQGMK YDGLTGPEEI RAADHQVLKN YYLLKGKPKN RMKDKDDFAE VVSVGKAFLP VEQTQCKLT
|
| |