Gene Rpic_4907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4907 
Symbol 
ID6285808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1258996 
End bp1259853 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID642619383 
Productinner-membrane translocator 
Protein accessionYP_001893418 
Protein GI187927073 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCT ACCTGCTCCA GGTCGTCAAC GGCGTGGGGA TCGGCATGCT CTACTTCCTG 
CTGGCGGTGG GGCTGTCGAT CATCTTCGGG CTGTTGCGCT TCGTCAATTT CGCCCACGGC
GCCTTCTATG CGCTCGGTGC GTATCTCTGC TTCCAGGCCC TGCAGATGGG CATGAATTTC
TGGTTGGCGC TTGTGCTCGC GCCCATCGTC ATCGGCGCGC TTGCCTGGGT GACGGAGAAG
GTGCTGCTGC GCCACGTGTA TGCGCAGGCG CACGAGTTCC ACATCGTCGT CACCGTGGGG
CTGGCGCTGG TGGTGCAGGA ACTCATCATC GTGGCGTGGG GGCCGCTGGG CGTGGATGTG
CCGGCGCCCG ATGCGCTGCA GGGCGTGGTG ATGTGGGGCG ATTTCGTCTA TCCGAAATAT
CGCCTCTTCG TGATCGGTTT TACCGCCGTG CTGGCGCTCG GGCTGTGGTG GCTGCTGGAG
GGCACGCGCC TGGGCAGCGC GGTGCGCGCG GGCAGTGAAT CGACCGAGAT GGTGTCGCTG
CTCGGCATCA ACGTGTTTCG CCTGTTCAGC CTGATGTTTG CGCTGGGTGC GGCCACGGCG
GCGGTGGCCG GTGTGCTGGC TGCGCCCATT CGCGGCGCGG AGCCCTTCAT GGGGGTGGAG
GCCCTCGGCG TCGCCTTCGT GGTTGTGGTG GTGGGCGGCA TGGGCAGCTT TGCGGGGGCA
CTGGTCGGCG GCCTGCTGGT CGGCATCGTG CAGAGCCTGA TGAGCACGCT GTGGCCCGAG
GGCGCGCGGC TGATGATCTA CGTGGCGATG GCGGCCGTGC TGCTGCTGCG CCCGCACGGC
CTGCTGGGGA GGGGATGA
 
Protein sequence
MNVYLLQVVN GVGIGMLYFL LAVGLSIIFG LLRFVNFAHG AFYALGAYLC FQALQMGMNF 
WLALVLAPIV IGALAWVTEK VLLRHVYAQA HEFHIVVTVG LALVVQELII VAWGPLGVDV
PAPDALQGVV MWGDFVYPKY RLFVIGFTAV LALGLWWLLE GTRLGSAVRA GSESTEMVSL
LGINVFRLFS LMFALGAATA AVAGVLAAPI RGAEPFMGVE ALGVAFVVVV VGGMGSFAGA
LVGGLLVGIV QSLMSTLWPE GARLMIYVAM AAVLLLRPHG LLGRG