| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4905 |
|---|
| Symbol | |
|---|
| ID | 6285806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 1257261 |
|---|
| End bp | 1258031 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642619381 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001893416 |
|---|
| Protein GI | 187927071 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CGCCCATCCT CCAAGCCACC GGCATCGTCA AGCAGTACGG CAAGTTCACT
GCACTGGGCG GCGTCGATTT GCGTGTGATG CACGGCACGG TCCACTCCGT CATCGGCCCC
AACGGCGCGG GCAAGACCAC GCTGTTCCAC ATGCTCACGG GCACGCGCAT GATCACCAGC
GGCACCATCG TCTTCGATGG CCACGACGTG ACGCGCGAGG CCGACTTCCA GCGCGTGCAG
CGCGGCATCG CGCGTTCGTT CCAGGTGACG AGCCTGTTCC CGAGCCTGTC CGTGCGCGAG
AACCTGCGCC TCGCTGCCCT CGGCACCACG CCGCGCCGTG CCATGCACGG CTGGCGCCTG
CCGCAGGGCG ATCTTGCCTG CAGCGATACG GTCGACCGCG TGCTCGATCG CCTTGAATTG
CCGCGCCTGG CCGACACGCC GGCCGCCGCG CTCTCGCATG GTCAGCAGCG TCGGCTGGAA
GTCGGCATGG CGCTGGCCGC CAATCCGCGC GCGATCTTCC TCGACGAACC GACTTCCGGC
ATGGGCGTGG ACGACCTGCC CGCCATGAAG ACGCTCATTC GCGGCCTGGC GCAGGACCAC
ACCGTCGTGC TGATCGAACA CAACATGGAC ATCGTGATGG ACATCTCCGA CACCATCACC
GTCATGCAGC AGGGCAAGGT GCTCATGGAG GGCACGCCCG ACGCCGTACG AGCGGACCCA
CGCGTGCGCG CCGCGTATCT CGGCAACATG ATCACGGGAG GCAAGAAATG A
|
|---|
| Protein sequence | MTTTPILQAT GIVKQYGKFT ALGGVDLRVM HGTVHSVIGP NGAGKTTLFH MLTGTRMITS
GTIVFDGHDV TREADFQRVQ RGIARSFQVT SLFPSLSVRE NLRLAALGTT PRRAMHGWRL
PQGDLACSDT VDRVLDRLEL PRLADTPAAA LSHGQQRRLE VGMALAANPR AIFLDEPTSG
MGVDDLPAMK TLIRGLAQDH TVVLIEHNMD IVMDISDTIT VMQQGKVLME GTPDAVRADP
RVRAAYLGNM ITGGKK
|
|---|
| |