Gene Rpic_4904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4904 
Symbol 
ID6285805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1256551 
End bp1257264 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID642619380 
ProductABC transporter related 
Protein accessionYP_001893415 
Protein GI187927070 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CGGCGATTCT CGACGTTGCA GACCTCCATG GCTATTACGG CAAGAGCCAC 
GTGCTGCAGG GCGTGGCGCT ATCGGTGGGC GAGGGTGAAC TCGTGACGCT GCTCGGCCGC
AATGGCGCGG GCAAGTCGAC CACGCTCAAG ACGATCGCCG GTGTGGTGAC GCCGCGTGGG
CAGGTGCGCT TTCGGGGCAA GGACATTGCC GGACAGCCGG CGCATCGCAT TGCCGCGCAG
GGTTTGTGCC TCGTGCCCGA GCATCGCGGC ATCTTCAAGC TGCTGACGGT GGAAGAGAAC
CTCAAGCTCG GCGCGCGGCG GGATTCTCCG TGGCAGCTGG CCGACATCTA TCGCATCTTC
CCGCGCCTGC ATGAGCGGCG GCGCAACGGC GGCGCCAACC TATCCGGTGG CGAGCAGCAG
ATGCTGGCCA TCGGCCGCGC GCTGATGAAC CATCCGCGTC TGCTGATGCT CGACGAGCCG
GTCGAAGGTC TGGCGCCCGT CATCGTGGAA GAGATCGTCG CGCAGCTGAA GGTCATCAAG
CAGGCGGGCG TATCCATCCT GCTCGTGGAA CAGAACCTCG AGGTCTGCAC GCAGCTCGCT
GACCGCCACG TGATCATTGA ACAGGGCCGT GTGGTCTACA CCGGCAGCAA CGAAGCCTTC
CGCGCCGACG ACGCCATCAA GGACCGCTAC CTTGGCGTCG GCCTGGCTGC ATGA
 
Protein sequence
MTTTAILDVA DLHGYYGKSH VLQGVALSVG EGELVTLLGR NGAGKSTTLK TIAGVVTPRG 
QVRFRGKDIA GQPAHRIAAQ GLCLVPEHRG IFKLLTVEEN LKLGARRDSP WQLADIYRIF
PRLHERRRNG GANLSGGEQQ MLAIGRALMN HPRLLMLDEP VEGLAPVIVE EIVAQLKVIK
QAGVSILLVE QNLEVCTQLA DRHVIIEQGR VVYTGSNEAF RADDAIKDRY LGVGLAA