Gene Rpic_4890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4890 
Symbol 
ID6285776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1240448 
End bp1241170 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content69% 
IMG OID642619366 
ProductLmbE family protein 
Protein accessionYP_001893401 
Protein GI187927056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0748012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG CGCTGCACGA CCGCGTCGCC CGGCTGGGTC CGGTGCTGGT GATCTCGCCG 
CACTTTGACG ACGCGATCTT CTCGTGCGGC AACCTGCTCG CCGCCCACCA CGGCAGCCAC
ACCATCACGG TGTTCGGCGG TGCGCCGCCT GCGCCCGTCA GTACGGAATG GGACAGTGGC
GCGGGCTTTG CGGATTCCAC CGAGGCGATC GCCGTACGCT GGGTGGAAGA CGCGCAGGCG
CATGCGCAGG TGAGTGCCAC CGCGCATCAC TTGGCGTTTT GCGACAGCCA GTATGGACAG
CCGCCCGACG CCATGGAGCT GCATCGCGCG CTGCATCGCC TGGTGGCGCG CTACGCCGCT
GACGCGGTGT TCATGCCGCT GGGGCTCTTC CATAGCGATC ACGTGCTCGT GCATGAGGCG
GCGCTGTCGC TGCTCCCCAG GCTGCCCCAG CGCCTGTGGA TCGGCTACGA GGATGCGCTG
TATCGGCGTG CGCGCGGCGC CGTGCAGGAC CGCATCGTCG CATTGGCGGG CCAGGGCATC
GTTGCCACGC CGGTGTGTCC GACATCCGCT ACCGACGGAC GGCAGAAGCG CCGCGCGGTG
GCCTGCTATG CCAGCCAGTT GCGCGCGTTC GGGCCCGGCG GGTTGGAAGA CGTGCACCAG
CCGGAGCGCT TCTGGCTGCT GGAACCCAGG CAAGGAGACC CCGATCATGC AAACGCTGGA
TGA
 
Protein sequence
MSRALHDRVA RLGPVLVISP HFDDAIFSCG NLLAAHHGSH TITVFGGAPP APVSTEWDSG 
AGFADSTEAI AVRWVEDAQA HAQVSATAHH LAFCDSQYGQ PPDAMELHRA LHRLVARYAA
DAVFMPLGLF HSDHVLVHEA ALSLLPRLPQ RLWIGYEDAL YRRARGAVQD RIVALAGQGI
VATPVCPTSA TDGRQKRRAV ACYASQLRAF GPGGLEDVHQ PERFWLLEPR QGDPDHANAG