Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4890 |
Symbol | |
ID | 6285776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1240448 |
End bp | 1241170 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642619366 |
Product | LmbE family protein |
Protein accession | YP_001893401 |
Protein GI | 187927056 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0748012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCG CGCTGCACGA CCGCGTCGCC CGGCTGGGTC CGGTGCTGGT GATCTCGCCG CACTTTGACG ACGCGATCTT CTCGTGCGGC AACCTGCTCG CCGCCCACCA CGGCAGCCAC ACCATCACGG TGTTCGGCGG TGCGCCGCCT GCGCCCGTCA GTACGGAATG GGACAGTGGC GCGGGCTTTG CGGATTCCAC CGAGGCGATC GCCGTACGCT GGGTGGAAGA CGCGCAGGCG CATGCGCAGG TGAGTGCCAC CGCGCATCAC TTGGCGTTTT GCGACAGCCA GTATGGACAG CCGCCCGACG CCATGGAGCT GCATCGCGCG CTGCATCGCC TGGTGGCGCG CTACGCCGCT GACGCGGTGT TCATGCCGCT GGGGCTCTTC CATAGCGATC ACGTGCTCGT GCATGAGGCG GCGCTGTCGC TGCTCCCCAG GCTGCCCCAG CGCCTGTGGA TCGGCTACGA GGATGCGCTG TATCGGCGTG CGCGCGGCGC CGTGCAGGAC CGCATCGTCG CATTGGCGGG CCAGGGCATC GTTGCCACGC CGGTGTGTCC GACATCCGCT ACCGACGGAC GGCAGAAGCG CCGCGCGGTG GCCTGCTATG CCAGCCAGTT GCGCGCGTTC GGGCCCGGCG GGTTGGAAGA CGTGCACCAG CCGGAGCGCT TCTGGCTGCT GGAACCCAGG CAAGGAGACC CCGATCATGC AAACGCTGGA TGA
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Protein sequence | MSRALHDRVA RLGPVLVISP HFDDAIFSCG NLLAAHHGSH TITVFGGAPP APVSTEWDSG AGFADSTEAI AVRWVEDAQA HAQVSATAHH LAFCDSQYGQ PPDAMELHRA LHRLVARYAA DAVFMPLGLF HSDHVLVHEA ALSLLPRLPQ RLWIGYEDAL YRRARGAVQD RIVALAGQGI VATPVCPTSA TDGRQKRRAV ACYASQLRAF GPGGLEDVHQ PERFWLLEPR QGDPDHANAG
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