| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4889 |
|---|
| Symbol | |
|---|
| ID | 6285770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 1239541 |
|---|
| End bp | 1240464 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642619365 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_001893400 |
|---|
| Protein GI | 187927055 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0764718 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACGC TGGATGACGC TCGTACCGCG CAACCGCCGT GCTCCATCGT CGTGCTCACG
CACAACCGCG CCGCGACGGT ACTCGACACG CTGGGTCAGC TCACCGCTTT GGGTGAGCCG
TGGCCCATCA TCGTGGTCGA CAACGGCTCC ACGGACGGCA CCGCAGACCA GATCGCCGCG
CGGTTTCCCG ACGTCACGCT CGTGCGCGCA CCACGCAACT ACGGCGCGGC CGGGCGCAAT
GTCGGCGCGG CTTCGGCCAA CACGCCGTAC GTGGCGTTCT GCGATGACGA CACCGCATGG
TTGCCCGGGT CCATTGGGCG CGCGGTGACC GTGTTGCAAC GGTACCCCGC CGTGGGCGTG
GTGGCGGCGC ACATCGTGGT CGGCCCCACG CGTCGCGACG ACCCTGCCTG CGAGCCGATG
GCCGCGAGCA CGCTGCCTGC CGACGGTTTG CCCGGTCCGG CGTTGCTGGG CTTCATGGCC
GGCGCCTGCG TGGTGCGGGC ACGTGCCTTC AGCGAGGCGG GCGGCTACCA GCGCGACCTT
TTCATCGGCG GGGAAGAAAG TGTGCTGGCG CTCGACCTTG TCGACGCGGG CTGGCACATC
GTCTACTGCC GGGAGGTGGT GACGCATCAC AACCCGTCGC CGGTGCGCGA TGTGATGCAA
CGCCGCGCGC TGCTTGCCCG CAACGAGTTG CTGAGCGCCT GGTTGCGGTT GCCGTCCGAC
CTCGCCTGGC GCGTCACAGG CCGTGCGCTG CGCGCAATGG TCGAGCAGGG CGTATTGGCC
GAAGCATTGC CGGGTGCGCT GGTGCGGCTG CCGCGCACCC TGCTGCGCCG GCATACCGTG
CAGCCTTGCA CCGTGGCGCT GTGGCGGCAG ATGGACGCCG ACCGCCAGCG CCGGCGCGCC
ATCCCCACGC TGTCCATCGG CTGA
|
|---|
| Protein sequence | MQTLDDARTA QPPCSIVVLT HNRAATVLDT LGQLTALGEP WPIIVVDNGS TDGTADQIAA
RFPDVTLVRA PRNYGAAGRN VGAASANTPY VAFCDDDTAW LPGSIGRAVT VLQRYPAVGV
VAAHIVVGPT RRDDPACEPM AASTLPADGL PGPALLGFMA GACVVRARAF SEAGGYQRDL
FIGGEESVLA LDLVDAGWHI VYCREVVTHH NPSPVRDVMQ RRALLARNEL LSAWLRLPSD
LAWRVTGRAL RAMVEQGVLA EALPGALVRL PRTLLRRHTV QPCTVALWRQ MDADRQRRRA
IPTLSIG
|
|---|
| |