| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4873 |
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| Symbol | |
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| ID | 6285723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1220894 |
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| End bp | 1222654 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642619349 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001893384 |
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| Protein GI | 187927039 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0999966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTACG CGCACAAAGA GCACGACCGT GGCCCACAGC GTTTCTGGAC ACGCTACGTC
TGGAGCCAGG ACCACAAGGT CATCGCGGTG CAGTACGCAC TCACGGCCAT TGCCATCGGG
CTGGTCGGGC TTGTGCTTTC GAACCTGATG CGGTTGCAGT TGGGCTTTCC GGGCCGGTTC
CCCTTCATCG ACGCCAGCCA CTACTACCAG TTCGTCACCA TGCACGGGAT GATCATGGTG
ATCTACCTGC TCACGGCGCT GTTCCTGGGC GGTTTCGGCA ACTACCTGAT CCCGCTCATG
CTGGGCGCGC GCGACATGGT GTTCCCGTTT CTGAACATGC TCAGTTACTG GGTGTACCTG
CTGGCCGTGC TGGTGCTGGT GGCCAGCTTT TTCGTGCCGG GCGGGCCGAC CGGCGCCGGT
TGGACGCTCT ATCCGCCGCA GGCCATCCTG CCGGGCACGC CGGGCACCGA GTGGGGCATC
GTGCTGATGC TGGTGTCGCT CGCCATCTTC ATCATTGCGG CCACGATGGG CGGGCTCAAC
TACGTGACGA CGACGCTGCA GGCACGCACG CGCGGCATGA CGCTGATGCG CATGCCGCTG
ACGGTGTGGG GCATCTTCGT GGCGACCGTC CTGGCGCTGC TGGCGTTTCC GGCACTCTTC
GTGTCCGCCA TCATGATGCT GCTCGACAAG ACGCTGGGCA CGAGCTTCTT CGTGCCGGCG
GTGGTGTCGA TGGGGCAGCC GTTGAAGCAC GCCGGCGGCA GCCCGCTGCT GTTCCAGCAC
CTGTTCTGGT TCTTCGGCCA CCCGGAGGTC TACATCGTCG CCCTGCCGGC CTTCGGCATC
GTGTCGGATC TCATCAGCAC GCACGCGCGC AAGAACATCT TCGGCTACCG GATGATGGTG
TGGGCCATCG TCATCATCGG GGCACTGAGC TTTGTCGTGT GGGCACACCA CATGTTCATC
GCCGGCATGA ACCCCTACTT CGGGTTCTTC TTCGCCACCA CCACGCTCAT CATTGCCATC
CCGACGGCGC TCAAGGTCTA TAACTGGGTG CTGACGCTGT GGCGCGGCGA CATCCACCTC
ACCGTGCCGA TGCTGTTTGC CATCGCGTTC ATCAGCACCT TCCTGATTGG CGGGCTGACG
GGGCTGTTCC TCGGCAACGT GAGCGTGGAT ATTCCGCTGT CCAACACGTA CTTCGTGGTC
GCGCACTTCC ATATGGTGAT GGGCGTGTCA CCGATCCTGG TGGTGTTTGG CGGCATCTAT
CACTGGTACC CCAAGGTGAC GGGCCGCATG CTCAACGACA CGCTGGGCCG TGCGCATTTC
TGGATCACCT TCATCGGCAC GTACCTGATC TATTTCCCGA TGCACTACCT GGGCATTCTC
GGCATGCCGC GCCGCTACTA CGCTTACGAG GGCTACAGCT TCATCCCCGC GTCTGCGCAG
TCATTGAATG CGTTCATCAC CGTCGTCGCC TTGGTTGTGG GCGTCGCGCA GTTGCTGTTC
CTGTTCAACC TCGCCTGGAG CCTGAAGCGC GGGAAACCGG CGAACGCCAA CCCGTGGCAC
GCCACCACCC TCGAGTGGCA GACGCCGCAA ACCCCGCCCG TTCATGGCAA CTGGGGGCCG
AACCTGCCGC AGGTCTACCG CTGGGCGTAT GAATACAGCC CGCCAGACCG GACGGAAGAT
TTCGTGCCGC AGAACGAGCC GCCGTCCGGC ATGCCAGCAA CTGAATCCGC CCCCGTCCAC
GCACGCGAGG TGCGCGCATG A
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| Protein sequence | MPYAHKEHDR GPQRFWTRYV WSQDHKVIAV QYALTAIAIG LVGLVLSNLM RLQLGFPGRF
PFIDASHYYQ FVTMHGMIMV IYLLTALFLG GFGNYLIPLM LGARDMVFPF LNMLSYWVYL
LAVLVLVASF FVPGGPTGAG WTLYPPQAIL PGTPGTEWGI VLMLVSLAIF IIAATMGGLN
YVTTTLQART RGMTLMRMPL TVWGIFVATV LALLAFPALF VSAIMMLLDK TLGTSFFVPA
VVSMGQPLKH AGGSPLLFQH LFWFFGHPEV YIVALPAFGI VSDLISTHAR KNIFGYRMMV
WAIVIIGALS FVVWAHHMFI AGMNPYFGFF FATTTLIIAI PTALKVYNWV LTLWRGDIHL
TVPMLFAIAF ISTFLIGGLT GLFLGNVSVD IPLSNTYFVV AHFHMVMGVS PILVVFGGIY
HWYPKVTGRM LNDTLGRAHF WITFIGTYLI YFPMHYLGIL GMPRRYYAYE GYSFIPASAQ
SLNAFITVVA LVVGVAQLLF LFNLAWSLKR GKPANANPWH ATTLEWQTPQ TPPVHGNWGP
NLPQVYRWAY EYSPPDRTED FVPQNEPPSG MPATESAPVH AREVRA
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