Gene Rpic_4863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4863 
Symbol 
ID6285607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1210742 
End bp1211476 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID642619339 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001893374 
Protein GI187927029 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.494797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAC TGCTCGTAGA AGACGACGAC ATGATCGGCG ACAGCGTGCG CAAGGGTTTG 
CGCCACGACG GCTTCACCAT CGATTGGGTG CGCGACGGCG AGGCGGCGCT GCACGCCGTC
ACGGCCCCGG GCGCGGGTGG CGCGGAAGCG GGCGGCACCC TGTTCGACCT GATGCTGCTC
GACCTGGGCC TGCCCAAGCG CGATGGGTTG GAGGTCGTGC GCGAGTTGCG ACAGCGCGGC
ATCGTCATCC CCATCCTCAT TCTGACCGCG CGTGATGCCG TGGCCGACCG TGTGGCAGGC
CTCAATGCGG GTGCGGACGA CTATCTCGTC AAGCCGTTCG ACCTGCAGGA GCTGGCCGCG
CGCATGCATG CGCTGCTGCG CCGCCAGGGC GGCCGCGCCG ATCCGCTCCT GCGCCACGGC
GATGTGGTGC TCAACCCCGT CACGCGCGAA GTCTTGCGCG ACGGGGTGCC GGTCAAGCTC
TCGGGGCGCG AGTTTGCGGT GCTGCACGCG CTGCTGGCCC GTCCGGGCAA GGTGTGGTCG
ATTGCGCAGT TGCAGGACAA CCTCTACGGT TGGGATGAGG AGGTCGGCAG CAACACGGTG
GAGGTCTATA TCCACGCGCT GCGCAAGAAG CTCGGCAGCC ACCTCATCCA GAACATTCGT
GGCGTGGGCT ATGTGATTCC GCGCGAGACG TCGGCGTCGC CTGCGGAACC TGCCAGCGGC
GAGGACCACC AATAA
 
Protein sequence
MRVLLVEDDD MIGDSVRKGL RHDGFTIDWV RDGEAALHAV TAPGAGGAEA GGTLFDLMLL 
DLGLPKRDGL EVVRELRQRG IVIPILILTA RDAVADRVAG LNAGADDYLV KPFDLQELAA
RMHALLRRQG GRADPLLRHG DVVLNPVTRE VLRDGVPVKL SGREFAVLHA LLARPGKVWS
IAQLQDNLYG WDEEVGSNTV EVYIHALRKK LGSHLIQNIR GVGYVIPRET SASPAEPASG
EDHQ