Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4861 |
Symbol | |
ID | 6285705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1207797 |
End bp | 1209275 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619337 |
Product | protease Do |
Protein accession | YP_001893372 |
Protein GI | 187927027 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.837631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGTC AGACCCTGGC ACGCAGCGCG GCTGGCTTGG CCGCCGTGAT CGCCGTCGCG GGCGGCTATG CCTATCTGCA GAAGGATGTG ATTACCCGGG CGGTGGCTGC GCCCATCGCA CCCGTCACCA CGCCGCAAAC CTCAATGGCA ACGCCTGCGG TGGCGGTGGC TGCGCCGATG GACTTCTCCG GCATCGTCGA GCGCTATGGC CCGGCCGTGG TCAACATCAG CGTGACCGCG CATGCGCAGC GCACGAGCAT GCAAGGTCTG CCGCCGGGCA TGAGCCCCGA TGACCCGTTT GCCGATTTCT TCAAGCACTT CATGCCGCAG ATGCCGCAGC AGCGCGGCGA CCAGATCGTT CGCGGGCTGG GCTCGGGCTT CATCGTGTCG TCCGATGGCC TCATCCTGAC CAATGCCCAC GTGGTGGACG GCGCGCAGGA GGTCAACGTC AAGCTGACCG ACCGCCGCGA GTTCAAGGCC AAGGTGCTCG GCGTGGACAA GCAATCCGAC GTGGCGGTGC TGCGCATCTC GGCCAAGAAC CTCCCGGTGG TCCAGATCGG CAGCCCGGCC AATACCAAGG TGGGTGAGCC GGTGGTGGCC ATCGGGTCGC CTTACGGGTT CGAGAACACC GTGACGGCGG GCATCGTCAG CGCCAAGTCG CGCTCCTTGC CCGACGATAC CTATGTGCCG TTCATCCAGA CCGACGTGGC CGTCAACCCC GGCAACTCGG GCGGGCCGCT GTTCAATCAG CACGGCGAGG TCATCGGGAT CAACTCCCAG ATCTACAGCC AGACCGGCGG CTATCAGGGG CTGTCGTTCG CCATCCCGAT CGACGTTGCG ATGAAGGTCG AACAGCAGCT CGTGGCCACC GGCAAGGTCA CGCGCGGGCG CCTTGGCATC GCCGTGCAGG AGGTCGACCA GTCCCTGGCG GATTCCTTCA ATCTGCCCAA GCCGGAGGGC GCGCTGGTCA ACTCTGTCGA GTCTGATGGT CCTGCCGCAA AGGCCGGCCT GCAGCCTGGC GACGTGATCC TCCAGATCAA CGGGGCACGC ATCGACCGCT CGGGCGATCT GCCGGAACAG GTGGCCGACA TCAAGCCGGG TACGACGGTG CCGCTGCAGA TCATGCGTCA GGGCAAGCCG ACCACGCTGT CGGTGACTGT GGGCGCAGCC AAGGACGCCA AGGTGGCATC CAATGACAAG GCGGCCCCCA ACCAGGGACG CCTGGGTCTG GCGGTGCGTC CGCTGCAACC CGACGAGAAG CGTCAGAGCG GCCTGCCGGG CGGCCTGGTG GTGATGGAGG CGAGCGGTCC GTCAGCCAAG GTCGGTATCC AGCCCGGCGA CGTGATCCTC TCGCTCAATG GCACGCCGGT GTCGTCGGTG CAGGAGCTGC GAACGTTGGT CGAGCGCGCC GGCAAGCATG TCGCCCTGCT GGTGCAGCGT GACGATACGA AGATTTTCGT GCCGGTGGAT CTGGGCTGA
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Protein sequence | MTRQTLARSA AGLAAVIAVA GGYAYLQKDV ITRAVAAPIA PVTTPQTSMA TPAVAVAAPM DFSGIVERYG PAVVNISVTA HAQRTSMQGL PPGMSPDDPF ADFFKHFMPQ MPQQRGDQIV RGLGSGFIVS SDGLILTNAH VVDGAQEVNV KLTDRREFKA KVLGVDKQSD VAVLRISAKN LPVVQIGSPA NTKVGEPVVA IGSPYGFENT VTAGIVSAKS RSLPDDTYVP FIQTDVAVNP GNSGGPLFNQ HGEVIGINSQ IYSQTGGYQG LSFAIPIDVA MKVEQQLVAT GKVTRGRLGI AVQEVDQSLA DSFNLPKPEG ALVNSVESDG PAAKAGLQPG DVILQINGAR IDRSGDLPEQ VADIKPGTTV PLQIMRQGKP TTLSVTVGAA KDAKVASNDK AAPNQGRLGL AVRPLQPDEK RQSGLPGGLV VMEASGPSAK VGIQPGDVIL SLNGTPVSSV QELRTLVERA GKHVALLVQR DDTKIFVPVD LG
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