| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4860 |
|---|
| Symbol | |
|---|
| ID | 6285656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 1207113 |
|---|
| End bp | 1207712 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642619336 |
|---|
| Product | chorismate mutase |
|---|
| Protein accession | YP_001893371 |
|---|
| Protein GI | 187927026 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1605] Chorismate mutase |
|---|
| TIGRFAM ID | [TIGR01806] chorismate mutase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.89966 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACC TTCTCAAGCG TCCCGCCGCC CGCAAGGGCG CTGCTCTCGC CTGTGCCTGC
TGGCTCGTGG CGGGTTGTGC AACCCAGGCC GGCGCGCAGG AAGGCGCGTT CGCACCGGTG
CTGCGCCATC TCGCCGATCG CCTCCTCACC GCAGATCAGG TCGCCCTGAG CAAATGGGAC
TCCGGCCAGC CGGTCTACGA CCCGGCGCGC GAAGCCCAGG TCATTGCGAA CGTCTCGGCC
ATGGCGCCTG CCTACGGCGT GCAGGCAGCG GACGCGGCAG AGGTCTTCAC CGACCAGATC
GAAGCCAACA AGACAGTGCA ATACGCCCTG CTCAACGATT GGCGCAGGGC AGGCAGTGCG
CCCACGGCGC CGCGGCAGAG CCTGCCGAAC ACCATCCGAC CGCAACTCGA TACGCTGCAG
AAAGCCATCC TGCAGGGGCT GCACGAGGCC GGGCCTGCCC GCGCCCGGGC AGACTGCGCG
ACACAGGTCG CACTCGACGC CGAACGCGTC GCCCGCGAGA AATCGCTCGA TACGCTGCAT
CGCGTCGCCC TGGACCGCGC CACGGCAAGA CTGTGCCGGC AGCGTTCGGC ACGTTCCTGA
|
|---|
| Protein sequence | MTNLLKRPAA RKGAALACAC WLVAGCATQA GAQEGAFAPV LRHLADRLLT ADQVALSKWD
SGQPVYDPAR EAQVIANVSA MAPAYGVQAA DAAEVFTDQI EANKTVQYAL LNDWRRAGSA
PTAPRQSLPN TIRPQLDTLQ KAILQGLHEA GPARARADCA TQVALDAERV AREKSLDTLH
RVALDRATAR LCRQRSARS
|
|---|
| |