| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4850 |
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| Symbol | |
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| ID | 6285660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1194561 |
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| End bp | 1196291 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642619326 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001893361 |
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| Protein GI | 187927016 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.102365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GGCGTCGCCT CGGTAGAACT AAGCGGACTG GTCAACACAC CGCGATGCCC
TGTCGAGCCT CCGACTCGCC GGGGTGGAGA CTGCTCTTGG AAAAACACGT ACAACGCAAC
CTCGGCGCCT GGCCCCTGAT GCTCACCGGC CTGGGCTCCA TCATCGGTTC GGGCTGGCTG
TTTGGCGCCG GTCATGCCGC ACAGGTCGCA GGTCCTGCGG CCATCTTCAC CTGGGTCATC
GGTGCCATCG TGATCCTGGC CATCGCCCTC ACGTATGCCG AACTGGGCGC CATGTTTCCG
GAATCGGGCG GCATGGTGCG CTATGCACGC TACTCGCATG GCTCGCTGGT GGGCTTCGTG
GCCGCCTGGG CCAACTGGAT CGCCATCGTC ACCGTCATCC CCATCGAGGC CGAGGCGTCG
ATCCAGTACA TGAGCAGCTG GCCCTGGGCA TGGGCACAGG CCCTGTTCCA ACACGGCGAA
CTGACGCCGC TGGGGCTGGT GCTCTCCGCG CTGCTCGTGA TCGTGTACTT CCTGCTGAAC
TACTGGGGCG TGAAGGTGTT TGCCAAGGCC AACAACGCCA TCACCATCTT CAAGTTCATC
ATTCCGGTGG CGACGGCTGT CGCGCTGATG GCCGCGGGCT TCCACCCCGG CAACTTCGGC
ATGACCGAGG GCGGGCAGCG CTTCGCCCCA TACGGCTGGT CAGCGGTGCT GACCGCCATC
GCCACCAGCG GCATCGTGTT CGCCTTCAAT GGCTTCCAGA GCCCGATCAA CCTGGCGGGC
GAGGCACGCA ACCCCGGGCG TAACGTGCCG ATCGCGGTGA TCGGCTCGAT CCTGCTGGCG
GCCGTGATCT ACGTCGCCCT GCAGATCGCC TTCCTGGGCG CCGTGCCGCC GGCATCGCTC
GTCAACGGCT GGCACGGCAT CGATTTCCAC TCGCCGTTTG CCCAGCTGGC GATTGCGCTC
AACCTGAACT GGCTGGCGAT CGTCCTGTAC ATCGACGCCT TCGTGAGCCC CTCGGGCACC
GGCAGCACGT ACATGGCCAC CACCACGCGC ATGATCTACG CGATGGAGCG CAACAACACG
CTGCCGGCCA TCTTCGGCCG CGTGCACCCG GTGTTTGGCG TGTCGCGTCC GGCCATGTGG
TTCAACCTGG GCGTGTCGTT CATCTTCCTG TTCTTCTTCC GCGGCTGGGG TGCGCTGGCT
GCCGTCATTT CTGTGGCTAC CGTCATTTCG TACCTGACGG GGCCGATCAG CGTGATGTCG
CTGCGCCGCA CGTCGCCGCA ACTGCATCGT CCGCTGCGCC TGGCGGGCCT GTCGCTGGTG
GCGCCGTTCG CCTTCGTGTG CGCCTCGCTG ATCCTCTACT GGGCGAAGTG GCCGCTGACC
GGCGAGATCA TCGTGCTGAT GCTGGTGGCG CTGCCCGTGT ACTTCTACTA CCAGGCGAAG
GCCGGCTGGC CCGACTTCAA GCGCGAGGTG AAGGGTGCCG GCTGGATGAT CGCGTACCTG
CCCACCATCG CTGCCCTGTC GTATTGCGGG AGCAAGGAAT TCGGCGGCCT CGGGTGGATT
CCATACGGCT GGGACATGGG CATCGTCGCG GCCGTCTCGC TGGGCTTCTA TCACTGGGGC
GTGAACAGCG GCTGGCATAC GCGCTACCTG GATGAGGTGG AGCACGTGCA TGACGACGTG
CAAGTGCGCG ACACCCGGCG TGCGCCGCGC GCCGTCCCGC AACGCGCCTG A
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| Protein sequence | MPKRRRLGRT KRTGQHTAMP CRASDSPGWR LLLEKHVQRN LGAWPLMLTG LGSIIGSGWL
FGAGHAAQVA GPAAIFTWVI GAIVILAIAL TYAELGAMFP ESGGMVRYAR YSHGSLVGFV
AAWANWIAIV TVIPIEAEAS IQYMSSWPWA WAQALFQHGE LTPLGLVLSA LLVIVYFLLN
YWGVKVFAKA NNAITIFKFI IPVATAVALM AAGFHPGNFG MTEGGQRFAP YGWSAVLTAI
ATSGIVFAFN GFQSPINLAG EARNPGRNVP IAVIGSILLA AVIYVALQIA FLGAVPPASL
VNGWHGIDFH SPFAQLAIAL NLNWLAIVLY IDAFVSPSGT GSTYMATTTR MIYAMERNNT
LPAIFGRVHP VFGVSRPAMW FNLGVSFIFL FFFRGWGALA AVISVATVIS YLTGPISVMS
LRRTSPQLHR PLRLAGLSLV APFAFVCASL ILYWAKWPLT GEIIVLMLVA LPVYFYYQAK
AGWPDFKREV KGAGWMIAYL PTIAALSYCG SKEFGGLGWI PYGWDMGIVA AVSLGFYHWG
VNSGWHTRYL DEVEHVHDDV QVRDTRRAPR AVPQRA
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