Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4820 |
Symbol | |
ID | 6285548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1158888 |
End bp | 1160150 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619296 |
Product | beta-lactamase |
Protein accession | YP_001893331 |
Protein GI | 187926986 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.85681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGA AACGTGGGCA GGCGCAGGGC ATGTCCCGCG ATCGGCTCGA TCGGGTCGGC CGTTTCATCG ACGATGCGTA CATCGCACCC GGCAAACTGC CGGGTGCCCT CGTCCAGGTC TGGCGGCGTG GCGAGCGGGT GCTGAACGCC GTGCTCGGTC AGGCCGACCG CGAGCGCCAG GTGCCGCTGA CCGAGGATGC GATCTTCCGC ATCTACTCGA TGACCAAGCC CATCACGTCG GTCGCGTTCA TGATGCTGGT GGAGGAATGC AAGGTCGCAC TCGATGACCC CGTCAGCAAA TTCATCCCGG CATGGCAAAA CCTGGGCGTG TATGCGGGCG GCTTCATGGA GAGCTTCCAG ACGAGCCCGG CGGCGCGGCC GATGCGCATG GTCGACCTGC TGCGCCATAC CTCGGGCCTG ACTTACGGCT TTCACCAGAA CACCAACATC GACGCGGCAT ATCGCCGGCT GAAACTCGGT GACATCGCCA CCGCCGGTAC GCTCGACGAC ATGATCGACA AGCTCGCGGG CTTGCCGCTG GAGTTCTCGC CCGGCGAGGC GTGGAACTAC TCCGTCTCCA CCGACGTGCT CGGCTATCTG GTCGGCAAGA TCAGCGGCAT GCCGTTCGAG ACCTTCCTGA AGGAACGGAT ATTCGATCCG CTGGGCATGG TCGATACGGC CTTCTACGTG CCGGAAGACA AGGCATCACG CCTGTGCGCC TGCTACGCCG TCGGGTCGCT CGGCTCGAAG GTGGTGGCCG AGCGGCCGGC CTTGCAGGAC GATCCGCGCA CCAGTGTCTA CCTCAAGCCG CCAAGCTTTG TTTCGGGCGG GGGCGGCCTC GTGTCCACCG CAGCAGATTA CCTGCGCTTT GCTCGCATGC TGCTGCAAGG CGGTGAGCTC GATGGCGTGC GCCTGCTGGG TCCGAAGACG CTGGAGCTGA TGACCGCCAA CCACCTGCCC GGCGGGGCGG ACATCTCCAG CATGTCGCGG CACTCCATGT TCAGCGAAGC CGCTTACGAC GGCGTCGGAT TCGGGCTCGG CTTTGCGACC ACGGTGGCAC AGCCCGCAAC GCTGATCCCG GGCAGCACGG GCGATTTCTT CTGGGGCGGT GCGGCTGGCA CGTTCTTCTG GGTCGACCCA CGGGAAGACC TGATCGGCCT GTTCCTGACG CAGGTGCTGC CGTCATCGGC GTACCCGGTA CGCCGGCAAC TGCGTACGTT GGTCTACAGC GCGATCACGG AGTCGGAGGG GGGCGCGCGC TGA
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Protein sequence | MDMKRGQAQG MSRDRLDRVG RFIDDAYIAP GKLPGALVQV WRRGERVLNA VLGQADRERQ VPLTEDAIFR IYSMTKPITS VAFMMLVEEC KVALDDPVSK FIPAWQNLGV YAGGFMESFQ TSPAARPMRM VDLLRHTSGL TYGFHQNTNI DAAYRRLKLG DIATAGTLDD MIDKLAGLPL EFSPGEAWNY SVSTDVLGYL VGKISGMPFE TFLKERIFDP LGMVDTAFYV PEDKASRLCA CYAVGSLGSK VVAERPALQD DPRTSVYLKP PSFVSGGGGL VSTAADYLRF ARMLLQGGEL DGVRLLGPKT LELMTANHLP GGADISSMSR HSMFSEAAYD GVGFGLGFAT TVAQPATLIP GSTGDFFWGG AAGTFFWVDP REDLIGLFLT QVLPSSAYPV RRQLRTLVYS AITESEGGAR
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