Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4814 |
Symbol | |
ID | 6285521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1154224 |
End bp | 1155123 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642619290 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001893325 |
Protein GI | 187926980 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTT CCGTCAAGCA GCTCCGCGCC TTCGCCGCGC TACGCGAGCA CAAGAACTTC ACGCAGGCGG CACAGACGTG TCACCTGTCG CAGTCGGCCT TCAGCGCGCT CATTCAGAAC CTGGAGGCCG ACGCAGGCGT GCGCCTGTTC GACCGCAATA CGCGCCATGT TGAACTGACG CCCGAGGGCG AAGCCTTTGC AGAATCTGCG CTGCGGCTGC TGGCCGATTT CGAGGCGACG TTTTCCGAGC TGCGCGATCG CGCCGCAGCC CGCACGGGGC GCGTAACGGT GACCGCCTTG CCGTCAATCG CGGCGGGCAT TCTGCCGGGC GTGCTGGCCG CGTTCTCTGC ACAGCATCCG GGCATTCAAC TGGCGCTGCA CGATCAACTG TCGGACCCGT GCATCGACAT GGTCCGGCGC GGATCGGCGG ACTTCGCCAT TGCGGCCATG GGCGCCGACA TGGCGGGCCT GACCGCGCAA CCGTTCTGCA CCGACGACTT CCACCTCGTC TGCCACCAGG ATCACCCGCT GGCGCGCAAG CCGGCGCTGG CCGTGGGCGA CCTCGTCGAC ACGCCGTTCA TCCACCTCGC ACGCAACACG AGCATCCGGC AATACCTGGA TGCGGCGCTC CACCCGACCA AGCTGCGCAG CGGCATGGAA GTCGAACACC TGGCCACTGC GGCGGCGCTG GTGGCGGCCA ACCTGGGCAT CACCGTCATT CCTGCGCTGG CGCTGTTCCA GTTCCGTTTG CCGGCGCTGG CGGTGCGGCC GCTGCCGCTG CCTGGGCTCG TGCGTACGCT GTATGTCATC CGACGCGACG GGCGCAGCCT GTCGGTGGCG GCGCAAGGGC TGCTCGACTT GCTGCTGGCG CACCCAGCGC ACACGACGGC GTCTGTTTGA
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Protein sequence | MNLSVKQLRA FAALREHKNF TQAAQTCHLS QSAFSALIQN LEADAGVRLF DRNTRHVELT PEGEAFAESA LRLLADFEAT FSELRDRAAA RTGRVTVTAL PSIAAGILPG VLAAFSAQHP GIQLALHDQL SDPCIDMVRR GSADFAIAAM GADMAGLTAQ PFCTDDFHLV CHQDHPLARK PALAVGDLVD TPFIHLARNT SIRQYLDAAL HPTKLRSGME VEHLATAAAL VAANLGITVI PALALFQFRL PALAVRPLPL PGLVRTLYVI RRDGRSLSVA AQGLLDLLLA HPAHTTASV
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