Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4797 |
Symbol | |
ID | 6285466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1133230 |
End bp | 1133958 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642619273 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_001893308 |
Protein GI | 187926963 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.421077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.182797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCCC GCCTGCCTAA ATACCTTGAA CTGGCCGATC GCATCCGGCT CGACATCCTG CATGGAGCGT TGCCGGCCGG TAGCGTTGCG CCCAGTGAGA ACGAAGTGGC TCTGCGCTAC GGGGTATCGC GGCTGACGGC GCGCCGTACG CTGAACGAGC TTGCGGCGCG CGGGCTGCTC AAGCGCTCGC GCGGACAACG CAGCGTAGTG CTCGACCGGG TGGGGCCGCA TCGGCCGGTA CTTTACGCGC CCGGCCAGTC GGATGCGGCG CTCGAGTACA CGCCTGGTGC CGTCTATACC GTCAGTGCGT TCCGGCTGGA GCCGGCCGAT CACACCGTGG CGGCCGCCCT GGGGCTTGAG CCGGGCGCGC AAGTCGCCTT CGTCGAGCGG CGCGCCCAGG TGGGTGGGCA GCCGGTCATG CTCTTGCGCA CGTGGTTGAC GTCGCGGCTG GCGGCCATGC TCGAGGCGCG CGACTTCGAG GACCGTCTGT TCGTACAGGT GTTCCAGCGC GCCAACCTGA CCATCGCCCG CTCGCGGGAG GCCCCGCTGG CCTGCGTGGC AGATGCCCAT CAGGCCGCGC AGCTTGACGT GAAGGCCGGG GTACCGCTGG TGCGCGTGCG CCGCATCGGC TACAGCGTGG CCGACATGCC GATTTCGCTG ACGTATTGCG ATTTCTCGCC CGATCGCTAC ACGCGCGAAG TTGACATCCG CGTCCTGCAA AACGACTGA
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Protein sequence | MTPRLPKYLE LADRIRLDIL HGALPAGSVA PSENEVALRY GVSRLTARRT LNELAARGLL KRSRGQRSVV LDRVGPHRPV LYAPGQSDAA LEYTPGAVYT VSAFRLEPAD HTVAAALGLE PGAQVAFVER RAQVGGQPVM LLRTWLTSRL AAMLEARDFE DRLFVQVFQR ANLTIARSRE APLACVADAH QAAQLDVKAG VPLVRVRRIG YSVADMPISL TYCDFSPDRY TREVDIRVLQ ND
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