| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4796 |
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| Symbol | |
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| ID | 6285465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 1131911 |
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| End bp | 1132969 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642619272 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001893307 |
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| Protein GI | 187926962 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0944571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA AGCGACGTTT CAAGCTGGCG GTGCTGGCCG CCGCAGCCCT GACCGCGGGC
GCGGCCCAGG CACAATCGTC CGTCACGCTC TACGGCCAGG TGGACGCCTG GGCGGGTGCA
ACCAAGAACT TCGGCCAGGA CCGTGCCTGG GGCGTCAATT CCGGCGGCAT GTCGACGTCG
TACTGGGGCA TGAGGGGCAG CGAAGACCTC GGCAACGGCC TGAAGGCGAT CTTCACGCTG
GAAGCCTTCT TCCGCCCCGA CACCGGCAAG GCCGGCCGCT TTGACGGCGA CCATTTCTTT
GCCCGTAATT CGTTCGTCGG CCTGGAGTCG AACACGTGGG GCTCGGTCAA GCTGGGTCGT
AACACCCCGC CGTACTTTGT TTCGACGATC CTGTTTAATC CGTTCATCGA TTCGTACACC
TTCTCGCCGA TGGTGTTCCA TACCTACCTC GGCAACGGCC GTACCGGTGC TGCGGGCATT
TCGGGGCTGG TGGGCGATTC GGGCTGGGAC AACTCGATCA TGTACTCGAC GCCTGACATG
GGTGGCCTGA CGGCCAACCT GATCTACGGC GCGGGCGAGC AAGCCGGCCA CAACGGTCAG
AACAAGTGGG GCGGCAGCCT GCTGTACTTC CGTGGCAACT TTGCAGCCAC GGCGGCGTTC
CAGCAGGTGC GCTTCGATGG CGCGCCTGGC GACCTGAACA GCCTGGTGGC TGGCTTTGCG
CGCCAGACGG CGGGGCAGTT GGGTGCTACC TACGACTTTG GCGTGGTCAA GCTGTACGGC
CAATACCAGT ACATCAAGAA CACGATCAGC ACCGGCGACG CCAAGAGCAA CGGCGGCCAG
CTCGGCGTGT CGATTCCGGT GGGCCCGGGC AGCGTCCTGG CGTCGTACGC GTACACCAAA
ACGACGGGCG CGGCAGACGT CAAGCGCAAC ACCTGGGCGG TCGGCTATGA CTATTCGCTG
TCCAAGCGCA CCGATGTGTA TGCAGCGTAC TTCCGAGACA AGGTGTCCGA TCTGTCGTCG
GCTGATACGT TCGGCGTGGG CGTCCGCGCA AAGTTCTAA
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| Protein sequence | MQFKRRFKLA VLAAAALTAG AAQAQSSVTL YGQVDAWAGA TKNFGQDRAW GVNSGGMSTS
YWGMRGSEDL GNGLKAIFTL EAFFRPDTGK AGRFDGDHFF ARNSFVGLES NTWGSVKLGR
NTPPYFVSTI LFNPFIDSYT FSPMVFHTYL GNGRTGAAGI SGLVGDSGWD NSIMYSTPDM
GGLTANLIYG AGEQAGHNGQ NKWGGSLLYF RGNFAATAAF QQVRFDGAPG DLNSLVAGFA
RQTAGQLGAT YDFGVVKLYG QYQYIKNTIS TGDAKSNGGQ LGVSIPVGPG SVLASYAYTK
TTGAADVKRN TWAVGYDYSL SKRTDVYAAY FRDKVSDLSS ADTFGVGVRA KF
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