Gene Rpic_4790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4790 
Symbol 
ID6285436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1127343 
End bp1127750 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content62% 
IMG OID642619266 
Productflagellar basal-body rod protein FlgC 
Protein accessionYP_001893301 
Protein GI187926956 
COG category[N] Cell motility 
COG ID[COG1558] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01395] flagellar basal-body rod protein FlgC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.398648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTAT TCAAGGTGAT GGATGTGGCT GGCAGCGCGC TCACCGCGCA GTCCAAGCGC 
ATGAACGTCG TAGCCTCCAA CCTGGCCAAT GCCGAGAGCG TGACGGGCCC GAACGGAACG
GCTTACCGTG CCAAGCAGGT GGTGTTCACG CCCGTACAGG AGTCTGACGA CTACGCCACC
GGCGTGTCGG TCGACCGGGT GGTGGAAGAC ACCGTCACGC CCATGAAGCG CATGCATCAG
CCGGGCAACC CCCTGGCCGA CGCCGACGGC TACGTGACCA TGCCGAACGT CGATGTGGTC
GACGAGATGG TCAACATGAT TTCCGCTTCG CGTTCGTACC AGGCCAACGT GGAAGTCGCC
AATACCACCA AGACGATGGC CGCCAAGGCA CTGACCCTGG GTCAGTAA
 
Protein sequence
MSLFKVMDVA GSALTAQSKR MNVVASNLAN AESVTGPNGT AYRAKQVVFT PVQESDDYAT 
GVSVDRVVED TVTPMKRMHQ PGNPLADADG YVTMPNVDVV DEMVNMISAS RSYQANVEVA
NTTKTMAAKA LTLGQ