Gene Rpic_4789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4789 
Symbol 
ID6285433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1126658 
End bp1127305 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content62% 
IMG OID642619265 
Productflagellar hook capping protein 
Protein accessionYP_001893300 
Protein GI187926955 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.739847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.428557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA CTTCCGCCAC CAGCACCCCC AGCACGAATA CCAGCAACAA CCTGTCCATC 
ACCAGCGGCA CCGATCTGCA GAACACGTTC ATGCAGCTTC TGGTTGCGCA GCTGCAGAAC
CAGGATCCGC TCAATCCGAT GGACAACTCG CAGATGACCT CGCAGCTGGC GCAGATCAAC
ACGGTGAACG GTATCCAGCA GTTGAACACC ACGATGTCGA GCATGGCCAC GCAGAACGCC
GCCACGCAGG CGTCGTCGCT GATCGGGCGT ACCGTGCAGG TGCCGTCCTC CACGCTGACG
CTTGCCTCGG GCTCGGCGAA CTTCGGCATC TCGGTGCCCA ACGGCGCCGA CGACGTGGTC
GTGACGATCA AGGACGCGAG CGGTAACACC GTCCGCAAGG TCGATCTTGG CGGCATGAGC
GCCGGCTCGG GCAACTACAC CTGGAACGGC AAGAACGACA GCGGTACCTC GGTGGCGGAC
GGCACTTACA GCATTTCGGT GTCCGCCACG CTGGGTGGCA AGGCAGCCAC GGCCAACGCC
CTTGGCGCTG ACAAGGTCAC GGGCGTGACC ATCACCAACG GCACGACGCA ACTGCAACTG
GCCTCGGGCA ATACGGCCAA GCTGTCGGAC ATCACCACCA TTCAATAA
 
Protein sequence
MTVTSATSTP STNTSNNLSI TSGTDLQNTF MQLLVAQLQN QDPLNPMDNS QMTSQLAQIN 
TVNGIQQLNT TMSSMATQNA ATQASSLIGR TVQVPSSTLT LASGSANFGI SVPNGADDVV
VTIKDASGNT VRKVDLGGMS AGSGNYTWNG KNDSGTSVAD GTYSISVSAT LGGKAATANA
LGADKVTGVT ITNGTTQLQL ASGNTAKLSD ITTIQ