Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4789 |
Symbol | |
ID | 6285433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1126658 |
End bp | 1127305 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642619265 |
Product | flagellar hook capping protein |
Protein accession | YP_001893300 |
Protein GI | 187926955 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.739847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.428557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCA CTTCCGCCAC CAGCACCCCC AGCACGAATA CCAGCAACAA CCTGTCCATC ACCAGCGGCA CCGATCTGCA GAACACGTTC ATGCAGCTTC TGGTTGCGCA GCTGCAGAAC CAGGATCCGC TCAATCCGAT GGACAACTCG CAGATGACCT CGCAGCTGGC GCAGATCAAC ACGGTGAACG GTATCCAGCA GTTGAACACC ACGATGTCGA GCATGGCCAC GCAGAACGCC GCCACGCAGG CGTCGTCGCT GATCGGGCGT ACCGTGCAGG TGCCGTCCTC CACGCTGACG CTTGCCTCGG GCTCGGCGAA CTTCGGCATC TCGGTGCCCA ACGGCGCCGA CGACGTGGTC GTGACGATCA AGGACGCGAG CGGTAACACC GTCCGCAAGG TCGATCTTGG CGGCATGAGC GCCGGCTCGG GCAACTACAC CTGGAACGGC AAGAACGACA GCGGTACCTC GGTGGCGGAC GGCACTTACA GCATTTCGGT GTCCGCCACG CTGGGTGGCA AGGCAGCCAC GGCCAACGCC CTTGGCGCTG ACAAGGTCAC GGGCGTGACC ATCACCAACG GCACGACGCA ACTGCAACTG GCCTCGGGCA ATACGGCCAA GCTGTCGGAC ATCACCACCA TTCAATAA
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Protein sequence | MTVTSATSTP STNTSNNLSI TSGTDLQNTF MQLLVAQLQN QDPLNPMDNS QMTSQLAQIN TVNGIQQLNT TMSSMATQNA ATQASSLIGR TVQVPSSTLT LASGSANFGI SVPNGADDVV VTIKDASGNT VRKVDLGGMS AGSGNYTWNG KNDSGTSVAD GTYSISVSAT LGGKAATANA LGADKVTGVT ITNGTTQLQL ASGNTAKLSD ITTIQ
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