Gene Rpic_4785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4785 
Symbol 
ID6285416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1123047 
End bp1123790 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID642619261 
Productflagellar L-ring protein 
Protein accessionYP_001893296 
Protein GI187926951 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.558956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCC CCCCGGTTTA CTCGCCCACG CACAGCGGCC GCGCTGTGTC CCCGTTGCGG 
ATGGTTCGAC TCGCCGTGCT CGGCACGGCC GCCTTGCTGG CCACGGCGTG CGGCATGCTG
CCACCGCCGG CGCCGATCGT GCAGGGCCCG ACCACCGCGC GCCCGCCGAT GCCGGTGATG
GCGCCGCGCC AGAACGGGGC GATCTACCAG GAGGTGGCGT CGGGCAGCGG AGGCTTCCGG
GGCATGTTCG AAGACCGCCG TGCACACATG GTCGGCGACA CCATCACCAT CGTCATCACC
GAGAACACGG CGGCCAGCAA GCAGACCTCC GGCAGCGTCA ACCGCACCGG CAGCATGAGC
GCTTCGGTGC CGACCTTCGC CGGCATGAAC GCGGGCGTGC TGTCGCTGCT CGGTGTGTCG
GCAAGCGACG CCAACAAGTT CGACAGCAAG GGCGCCAATG GCGCGCAGAA CAACTTCACC
GCCACGATCA CCGTGACGGT CGTGGAGGTC CTCTCCAACG GCAACCTGGT GGTGAGCGGC
GAAAAGCAGA TGGCCGTGGG CCAGGGCACC GAGTCGATCA AGTTCTCGGG CGTGGTTAAC
CCCACCACCG TCAACAACCA GAACACCGTG CTGTCCACCC AGGTGGCGGA CGCACGCATG
GAATATCGCG GCACGGGCTA TGTGGCCGAG TCGCAGCAGA TGGGCTGGCT GTCGCGGTTC
TTCCTGACCG TGTCGCCGTT CTGA
 
Protein sequence
MHTPPVYSPT HSGRAVSPLR MVRLAVLGTA ALLATACGML PPPAPIVQGP TTARPPMPVM 
APRQNGAIYQ EVASGSGGFR GMFEDRRAHM VGDTITIVIT ENTAASKQTS GSVNRTGSMS
ASVPTFAGMN AGVLSLLGVS ASDANKFDSK GANGAQNNFT ATITVTVVEV LSNGNLVVSG
EKQMAVGQGT ESIKFSGVVN PTTVNNQNTV LSTQVADARM EYRGTGYVAE SQQMGWLSRF
FLTVSPF