Gene Rpic_4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4782 
SymbolflgK 
ID6285408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1118763 
End bp1120700 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content63% 
IMG OID642619258 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_001893293 
Protein GI187926948 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.419966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCT CCCTCCTGAA CATTGGCGCG ACCGGCCTGC GGGTTGCCGA TATCAACTTG 
CAGGTGACCG GCAACAACAT TGCCAACGCG AATACTCCAG GCTATTCGCG GCAGGAAGCC
GTGCAGACGG AGAATATTCC GCTATACGCG GGCGTTGGCT ATCTGGGCCA GGGTGCCAAT
GTCACGACCG TCAAGCGCAT CTACGATCAG TTTCTGACCG CGCAGGTGCA GAACGGCCAG
GCCGCCACGA GCGCGGCTGA CCAGCTCAAT AGCCTGCTTT CGGGGTTGAG CAAATACGTG
TCGGACTCCA ACAGTGGCCT CAGTTCGGCG CTCACCAGTT TTTTCAATGG CGCCGATGGG
CTGGCCTCCA ACCCATCCAG CACGACTGCG CGTCAGGTGT TTCTGAACGG GGCATCTGGT
CTGCAGAGCC GCTTCAATTC CATTGCCGGG CAGCTGAATG CGTTGTCCGG GCAGGTGAAT
ACGCAGGTGC AGACCCAGAT CAGCTCCGTC AACGGCACCG CCCAGCAGAT CGCCGCCCTG
AATGACCAGA TTGCCAAGGC TGAGGCCTCC ACCGGTCAGC CTGCGAACGA TCTGCGTGAC
CAGCGCGATC AGCTTGTCCA GACGCTGAAC CAGTCGATCA AGGCGAGCGT GGTGCAGACC
GGCGACGGGC AATACAACAT CTATGTCGGC AACGGCCAGG CGTTGGTGCA GGGCAACCAG
AGTTATCAGT TGACGGCAGT GCCGTCGGAG TATGACCCGA CGCAACTGTC GGTGGGCTAC
AAGAGTCCGG CCGGTACGGT CACCATCGAT GACAGCCAAC TGGGCGGTGG CGCGCTGGGC
GGGCTGATGG ATTTCCGCCG CAACACGCTC ATTCCGGCGC AAAACAGCCT CGGCCGTCTC
GCCGCAGCCG TGTCGGCCGA CGTAAACACG CAGAACAAGC TGGGCATGGA TGCCAACGGA
AACCTGGGTA CCGATCTGTT CTCGGTGGCC GGGCCCAGCG TTGCAGCCAG CAGCAACAAC
ACCGGCAGCG CCACCCTCAC GGCCAGCATC ACCAACGCCA ACGCGGGCCA GGGTTACGAC
TACCAGGTCA AGTACCAGGG CGGCGCCTAC ACCATCTCGC ACTATCCGGA CGGCTCTGCG
TCTCAGACCG TGACGAGCTG GCCGACCATC ATCGACGGCG TCACGCTCAA CCTGTCGGGC
ACGATGAACA GCGGCGACTC CTTCCTCGTG CGTCCGACCG CCGACGCCGC CGCCACGATG
CAGACGCTGA CCACCGATTA TCACGACGTG GCGGCCGCCA CGCCGGTGGT GCTCACCCAG
GGCAGCAACA ACACGGGTAG CGCAGCAGTG TCGTCCCTCA GTGTGAACAG CACGTACGCC
AGTTCGCCGC TCACGTCGCC GATCAGCCTG ACCTACAGCT CTGCCGTGGG CGGGTCACTC
TCGGGCTTTC CGAGCACCGT GACGGTGACT GCCAACGGCA CGTCCACCAC CTACACCGGC
GGCACCGCAC CTTACACGCA GGGCGCGACG TACGTTTTCA ACGGCGTGCA GATGACGCTC
TCGGGCACGC CCGGCAACGG CGATACCTTC ACCATCTCGG CCAATACGGC CAACAGTACC
GACAACGGCA ACGCCAGTGC GCTTGCCAGT CTGCGTAACG CCACGCTGCT CGACGGTGGC
ACCGCCTCCA TCGGTACGGC CTGGAACAGT CTGGTCACGC AGGTGGGTGT GCAGGCCAAC
ACGGCCGGTA CCAATCTGAC GTCGCAGAAG GCGCTGCTGG CAAGCTCGAC GTCGCAGCAG
CAATCCGTCT CGGGCGTCAA TCTGGATGAT GAAGCGATGA ACCTGATGAA GTACCAGCAG
GCCTATCAGG CAGCGGCCAA GGTCATGCAG ACGGCCAATT CGCTGTTCGA TTCGCTGCTG
TCGATCGCCA ACGGCTGA
 
Protein sequence
MSSSLLNIGA TGLRVADINL QVTGNNIANA NTPGYSRQEA VQTENIPLYA GVGYLGQGAN 
VTTVKRIYDQ FLTAQVQNGQ AATSAADQLN SLLSGLSKYV SDSNSGLSSA LTSFFNGADG
LASNPSSTTA RQVFLNGASG LQSRFNSIAG QLNALSGQVN TQVQTQISSV NGTAQQIAAL
NDQIAKAEAS TGQPANDLRD QRDQLVQTLN QSIKASVVQT GDGQYNIYVG NGQALVQGNQ
SYQLTAVPSE YDPTQLSVGY KSPAGTVTID DSQLGGGALG GLMDFRRNTL IPAQNSLGRL
AAAVSADVNT QNKLGMDANG NLGTDLFSVA GPSVAASSNN TGSATLTASI TNANAGQGYD
YQVKYQGGAY TISHYPDGSA SQTVTSWPTI IDGVTLNLSG TMNSGDSFLV RPTADAAATM
QTLTTDYHDV AAATPVVLTQ GSNNTGSAAV SSLSVNSTYA SSPLTSPISL TYSSAVGGSL
SGFPSTVTVT ANGTSTTYTG GTAPYTQGAT YVFNGVQMTL SGTPGNGDTF TISANTANST
DNGNASALAS LRNATLLDGG TASIGTAWNS LVTQVGVQAN TAGTNLTSQK ALLASSTSQQ
QSVSGVNLDD EAMNLMKYQQ AYQAAAKVMQ TANSLFDSLL SIANG