Gene Rpic_4781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4781 
Symbol 
ID6285085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1117736 
End bp1118695 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content62% 
IMG OID642619257 
Productflagellar hook-associated protein 3 
Protein accessionYP_001893292 
Protein GI187926947 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.892762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.741415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTCA GTACCGCCCA GTTCTTCGCG CTGTCCAGCG CCTCAATGCA GAACACGCAA 
TCGAACCTGC TGACGTTGCA GCAGCAGCTC GCGAGCGGCA TTGCGCTCAA TAGCGCGGGT
GACAACCCGA GCGCGTTTGG CCAGATGGCG CAACTGCAGC AGACGCAGGA CGCCAATGAC
CAATACCAGG TCAACCGTGA CGCAACGGAC GCACGGCTGA CGAACGTCTC GTCGGCGTTG
ACCAACCTGG TGACGACGCT GCAGCAGGGC AAGCAGTCGA TGGTGGGGGC CAACACTTCG
CTGATGACGG ATTCGCAACG CATCGGCGTG CTGGCGCAGG TCAAGCAGCA GTATCAGCAA
TTGCTGTCGA TCGCCAACCA GCGTGATCCG TCGGGCGTGG CGTTGTTCGG CGGTGCCAAC
GGCACGACCG ATCCGTTTGT CAGCTCGGGC GGCTCGGTCC AGTATGTCGG CACCGGCCAG
CCTCCCACGG TGCAGGTCTC GCAGAACATC TCGATGCCGA ATTCGGTCGC GGGCGATTCC
GTGTTCGTGC GCATACCGAA TACCGACCCG GCCAATCCGT CGGCCAATCA GAGCATCTTC
AAGACATACG AAAACCTGAT CACGGCGCTC TCGACCCCGA TCAACGCCGC CACCCAGGCC
ACTGACGTTG CCAGCCTGCA GAAGGCCGTG CAGACGGCGC AGGGCAATCT GGACAATGCC
TATCAGGTCG CACTGCAGGC GCAGGTGACG GTGGGCACGC AGCAGGCGCA GATCACCACG
CTCAACAGCA GCGGCTCGAA CTACGGCGAG CAGTTGAAGG AGCAGATCTC CAAGCTGCAG
TCGGTGGATT ACACGAGCGC CATCTCGCAG TTCTCGCAGC AGCAGGTGTC GCTGCAGGCT
GCGCAGAAGA CGTTTACCGC CATGCAGGGC ATGTCGCTGT TCCAGTACAT CAACCCCTGA
 
Protein sequence
MRVSTAQFFA LSSASMQNTQ SNLLTLQQQL ASGIALNSAG DNPSAFGQMA QLQQTQDAND 
QYQVNRDATD ARLTNVSSAL TNLVTTLQQG KQSMVGANTS LMTDSQRIGV LAQVKQQYQQ
LLSIANQRDP SGVALFGGAN GTTDPFVSSG GSVQYVGTGQ PPTVQVSQNI SMPNSVAGDS
VFVRIPNTDP ANPSANQSIF KTYENLITAL STPINAATQA TDVASLQKAV QTAQGNLDNA
YQVALQAQVT VGTQQAQITT LNSSGSNYGE QLKEQISKLQ SVDYTSAISQ FSQQQVSLQA
AQKTFTAMQG MSLFQYINP