Gene Rpic_4778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4778 
Symbol 
ID6285267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1114743 
End bp1115471 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID642619254 
ProductMethyltransferase type 11 
Protein accessionYP_001893289 
Protein GI187926944 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.683048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.945308 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA CGTCTACGCC TGCACATGTT GGTTCATTTA TTCCGGAAAC CGCATTTGGC 
GTCTGGTTTC TGCGCACGCA CACGTGGGAG CATCATGTAT TGCGTGTGGC CATCAACGAC
CTCAGGCGTC TGATCACAAC CCCGCTGCCC GCCGCACCCG TCATGGTGGA CGTGGGTTGT
GGGCAGGGCA TCTCGTTCCG CCTGCTGGAG CAAGCGTTTG CTCCGCAGCG CATCGTCGGT
GTGGACTGTC ACGCGCCATC CCTCGACGCG GCGCGTGAAG CCGCCCGCGC CATCGGTACA
CCAGTGGACA TCCTGCAGGG CGATTGTGCG GCACTGCCGC TGCCGGATGC GTGCGCCGAC
ATCGTGTTTT GCCATCAGAC GTTTCATCAT CTGGTCGAGC AGGAGCGCGC GCTGGCTGAG
TTTCACCGCG TATTGAAACC GGGCGGCTTG CTGCTGTTTG CCGAATCCAC GGATGCGTAT
ATCAAATCCT GGGTGATCCG CTTGCTGTTC CGGCATCCGA TGCATGTGCA GAAAAGCGCA
GACGGTTATC TGCAGATGCT GCGCGCGGGC GGCTTTCATT TCGAGCCGCG TCATGTTTCC
CTGCCGTATC TCTGGTGGAG CCGGGCAGCC GACTTTGGTT TGTTCGAGCG TCTGGGCCTG
CATCGTCCCA AGCCTGGCAA GCGGCGCGAG ACGCTGGTCA ACGTCGCCGC TGTCAAACCT
CTTGCCTGA
 
Protein sequence
METTSTPAHV GSFIPETAFG VWFLRTHTWE HHVLRVAIND LRRLITTPLP AAPVMVDVGC 
GQGISFRLLE QAFAPQRIVG VDCHAPSLDA AREAARAIGT PVDILQGDCA ALPLPDACAD
IVFCHQTFHH LVEQERALAE FHRVLKPGGL LLFAESTDAY IKSWVIRLLF RHPMHVQKSA
DGYLQMLRAG GFHFEPRHVS LPYLWWSRAA DFGLFERLGL HRPKPGKRRE TLVNVAAVKP
LA