| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4778 |
|---|
| Symbol | |
|---|
| ID | 6285267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | - |
|---|
| Start bp | 1114743 |
|---|
| End bp | 1115471 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642619254 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_001893289 |
|---|
| Protein GI | 187926944 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.683048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.945308 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCA CGTCTACGCC TGCACATGTT GGTTCATTTA TTCCGGAAAC CGCATTTGGC
GTCTGGTTTC TGCGCACGCA CACGTGGGAG CATCATGTAT TGCGTGTGGC CATCAACGAC
CTCAGGCGTC TGATCACAAC CCCGCTGCCC GCCGCACCCG TCATGGTGGA CGTGGGTTGT
GGGCAGGGCA TCTCGTTCCG CCTGCTGGAG CAAGCGTTTG CTCCGCAGCG CATCGTCGGT
GTGGACTGTC ACGCGCCATC CCTCGACGCG GCGCGTGAAG CCGCCCGCGC CATCGGTACA
CCAGTGGACA TCCTGCAGGG CGATTGTGCG GCACTGCCGC TGCCGGATGC GTGCGCCGAC
ATCGTGTTTT GCCATCAGAC GTTTCATCAT CTGGTCGAGC AGGAGCGCGC GCTGGCTGAG
TTTCACCGCG TATTGAAACC GGGCGGCTTG CTGCTGTTTG CCGAATCCAC GGATGCGTAT
ATCAAATCCT GGGTGATCCG CTTGCTGTTC CGGCATCCGA TGCATGTGCA GAAAAGCGCA
GACGGTTATC TGCAGATGCT GCGCGCGGGC GGCTTTCATT TCGAGCCGCG TCATGTTTCC
CTGCCGTATC TCTGGTGGAG CCGGGCAGCC GACTTTGGTT TGTTCGAGCG TCTGGGCCTG
CATCGTCCCA AGCCTGGCAA GCGGCGCGAG ACGCTGGTCA ACGTCGCCGC TGTCAAACCT
CTTGCCTGA
|
|---|
| Protein sequence | METTSTPAHV GSFIPETAFG VWFLRTHTWE HHVLRVAIND LRRLITTPLP AAPVMVDVGC
GQGISFRLLE QAFAPQRIVG VDCHAPSLDA AREAARAIGT PVDILQGDCA ALPLPDACAD
IVFCHQTFHH LVEQERALAE FHRVLKPGGL LLFAESTDAY IKSWVIRLLF RHPMHVQKSA
DGYLQMLRAG GFHFEPRHVS LPYLWWSRAA DFGLFERLGL HRPKPGKRRE TLVNVAAVKP
LA
|
|---|
| |