Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4769 |
Symbol | |
ID | 6285352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1105811 |
End bp | 1106467 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619245 |
Product | conserved hypothetical signal peptide protein |
Protein accession | YP_001893280 |
Protein GI | 187926935 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.294682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACGC TGATGGGGAC CGTACGCGCA GGGTGCATCA GCTTATTGCT GACAACCGCC AGCACATTCG CTCACAGCGC TCCCAGCGCG ACGCAACAGA GCAGCGCGCT TGTCTCGCAG GTGGCAGCGC AACTTGCACA GGCCAATGGC GTGCGCGCTC AGTTTGTGCA GACGCAATCG CTGCAGGCCA TGCAGCGGCC GCTGGTAAGC AGCGGCACGC TGCTGTTCCT TCGCGAACAT GGCGCGATCT GGCGGGTCGA GCAGCCACAC CGCATGACGT ATGTGATGAC GGACGCGGGT GTCACCACGC TCGATGCCGA TGACAAGCCC GTGGCGCGCG GCGCACGCAA TGCCGCCGGG GTGGCCCAGG TCTCGCGCAT GATGCGCGCC ATGCTGACGG GCGACCTGTC GGCGCTGTAT TCGCAGTTTG ACGTCAACGC CCAAGGCAGC GTCAGCCGAT GGCATCTGCG GCTGATTCCC GCTCAGCCTC AGCTTGCCCA GGCATTGCGC GGACTTGATC TGGCAGGCGA CACCTACGTG CGCAGCATCC GTGTGCAGTC GGCCAATGGC GACGAAACAC GCATCGAGTT CACCGGCAGC ACGCGCGTGG AGGCACCCAA TGCCGCCGAA CGCGCCCTGC TTGGGGCGCC CCGATGA
|
Protein sequence | MATLMGTVRA GCISLLLTTA STFAHSAPSA TQQSSALVSQ VAAQLAQANG VRAQFVQTQS LQAMQRPLVS SGTLLFLREH GAIWRVEQPH RMTYVMTDAG VTTLDADDKP VARGARNAAG VAQVSRMMRA MLTGDLSALY SQFDVNAQGS VSRWHLRLIP AQPQLAQALR GLDLAGDTYV RSIRVQSANG DETRIEFTGS TRVEAPNAAE RALLGAPR
|
| |