| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4761 |
|---|
| Symbol | |
|---|
| ID | 6285331 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 1098451 |
|---|
| End bp | 1099257 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642619237 |
|---|
| Product | phospholipid/glycerol acyltransferase |
|---|
| Protein accession | YP_001893272 |
|---|
| Protein GI | 187926927 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.043692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCA CACTGAGCGC TCGCATCAAC CAGGCTTGGC GCTTGGCTGC GACCGGCCTC
GCCTTCACGG TCTTCGGCAT CTGCGGGCTG CTGTTTTCCA TCATCGTCTT TCCACTGGCC
TGGCTGTGGC CGCACCGCGC CACGCGCCAG CGCACCGTCA CCTTCGTCAT CCACTGGTTC
TTCCGTGCGC TCGTGCGGGC ACTGCAATGG CTGGGGGTGA TGCGAGTGGA CGTTCAGGGG
GCCGAGCTGT TGCGCCAGGG CGGGCCCGCC ATCGTGGTGG CCAACCACCC CACGTATCTG
GACGTGATGG TGCTGCTGGC GCTCACGCCA TCCGCCTGCT GCGTGGTCAA GAACGCGCAC
TGGAGCAACC CGTGCTTCTG GGGCATCGTG CGGGCGGCCG AATACATCAG CAACGCCGAC
CCCACCCAAC TGGTCGAAGC AGGCGCGCGC CAACTGGCTT CGGGCTACAC CATGATCATC
TTCCCCGAGG GCACGCGCAG CCCCGCCAGG CACCGGTTGC ACCCGTTCTC GCGCGGTTTT
GCCCATATGG CACTGAACGT CGGGGCGCCC ATCCTGCCCG TGCTGATGGA TTGCAACCCG
CCCGCCTTCA CCAAGACCAT GCGCTGGTAC GACGTGCCCC CGCAGGCGTT TTGCATGAAG
GTCGCCGTGC TCGCACCGGT CAGTGTCGCG CAGTATGTGC CCGAGGGCTC GCCTGCCACG
CTGGCGGCGC GTGCGCTGAC CACCGGTATC GAAACCCACA TTACCGACCA CCTTCTGCAA
TATGGATTCC TTGAAGCTCG AAATTAA
|
|---|
| Protein sequence | MASTLSARIN QAWRLAATGL AFTVFGICGL LFSIIVFPLA WLWPHRATRQ RTVTFVIHWF
FRALVRALQW LGVMRVDVQG AELLRQGGPA IVVANHPTYL DVMVLLALTP SACCVVKNAH
WSNPCFWGIV RAAEYISNAD PTQLVEAGAR QLASGYTMII FPEGTRSPAR HRLHPFSRGF
AHMALNVGAP ILPVLMDCNP PAFTKTMRWY DVPPQAFCMK VAVLAPVSVA QYVPEGSPAT
LAARALTTGI ETHITDHLLQ YGFLEARN
|
|---|
| |