Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4759 |
Symbol | |
ID | 6285246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1096559 |
End bp | 1097347 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619235 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_001893270 |
Protein GI | 187926925 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0696365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCAGT TCACCGCCGC CCAGCTCAAC GGCTGGATTG CCATGTACTG GTGGCCGCTG GTACGCGTGC TGGCGTTCAT CGCCATGGCG CCGCCGTTTG CCAACACCGA AGTGCCGACC TCGATCAAGA TCGCCCTGGG CGTGATCATC ACGGTGGCGC TGGCGCCCAT GCTGCCTGTG CCGGTAGGCG TTTCGGTGGG TTCCTATGAA GGGCTGTGGA TCACGCTGCT GCAGGCGGTG ATCGGGCTGT CGCTGGGCTT CTGCGTGCAG CTCGTGTTCT CGGCCATCAG CGGCGCGGGT GAAGTGATGT CGGTGCAGAT GGGCCTCGGT TTCGCCTCGC TGCTCGACCC GCAGCAGACA GAAAGCAGCA TGCTGCTGGG CCGCTTCATC AGCCTCACGG CCATCACCGC ATTCATCGCC GGCGACGGTC ACCTCGTGTT GTTGCACGCG CTGTTCGACA GCTTCACCGC CCTGCCCGTC TCAGCCGCGC CCCTGGCCAA TCCCGGCTGG CAGACGCTGG CCGGCGGCGG CACGATGGTC TTTGCGCTGG CCGTGCGGAT CGCCCTGCCG ATCATTGCCA TCATGCTGGT CGTCAACCTC GGGTTTGCGG TGCTCTCACG CACCGCGCAG GCGCTGAACC CGTTTGCCGT GGGCATTGCC GCCACGCTGG TGGTGGGTCT GATGCTGGTC ATGGTGATGA TGACCTCGCT TGCACCCGTG GTGGAGCGCT CCGTCATGGA TGCGCTGGAA CTCGGTGGGC GGGCATTCGG GCAGTTCGGG GCGCAATGA
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Protein sequence | MIQFTAAQLN GWIAMYWWPL VRVLAFIAMA PPFANTEVPT SIKIALGVII TVALAPMLPV PVGVSVGSYE GLWITLLQAV IGLSLGFCVQ LVFSAISGAG EVMSVQMGLG FASLLDPQQT ESSMLLGRFI SLTAITAFIA GDGHLVLLHA LFDSFTALPV SAAPLANPGW QTLAGGGTMV FALAVRIALP IIAIMLVVNL GFAVLSRTAQ ALNPFAVGIA ATLVVGLMLV MVMMTSLAPV VERSVMDALE LGGRAFGQFG AQ
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