Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4749 |
Symbol | |
ID | 6285297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 1086793 |
End bp | 1088835 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619225 |
Product | flagellar hook-associated 2 domain protein |
Protein accession | YP_001893260 |
Protein GI | 187926915 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.18263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACTA CCACCACCTC CACGACCAGC AACTACGTTC CACCGATCTC GATTCCCGGT ATCGGGACGA GCATCGACGT CAACACGCTG GTCTCCAGCC TGATGAAGGT GGAAAGTCAG CCCCTGACGC TGCTGCAGAA TCAGCAGAGC TCGTACCAGA CGCAGCTCTC GGCAGTGGGG ACGCTCAAAA GTGCGCTGTC AACTTTCCAG ACTGCGCTCT CGAACTTGAC CACCGCGTCG AACTACAGCG CGATGAAGGC CAGCGGCTAT GACACGTCGG TGCTGAGCGC TTCCGTGACC AGCGCCGCAG CGGCGGGCTC ATACGCAGTC AATGTCTCGC AGCTTGCGCA ATCGCAGGTG CTGGCCGCGC AGGGGCAGAC GTCGACCACC ACGGCAATCG GCAGCGGGAC GTCCACCACG GTGTCGTTCT CGTTTGGCAC GGTGTCCGGC GGCACGTTTT CCAATGGTAA ATACTCGGGC GCCACCTTCA CGCAGAACGG CAGCCTGGCG GGCGGTTCGA TCACCATCAA CTCGTCGAAC AACACGCTGG CGGGCATTCG CGACGCCATC AATTCCGCCA ATCTGGGCGT CTCTGCCAGC ATCGTGAATG ATGGCAGCGG CAACCCGTAT CGCCTGGTGC TGACCTCCAC GGCGGGCGGC TCGAACTCGG AGATGAAAAT CTCTGTCTCG GGCGACTCGA CGTTGCAGTC GCTGCTTGCG CAGGACCCGG CCGGCACGCA GAACATGACC GAGGTGACCA CGGGCCAGAA CGCCCTGGCC ACCATCAACG GCATTGCCGT GCAGAGCCCG ACCAACACAT TGTCCAACGT GGTGACGGGC ACGTCGTTTA CGCTCGCCAA GACGGGAAGC ACCACCGTGA CGGTGGCGAA CGATCCGACC GCGACGACCA ATGCCGTCAA CAGCTTCGTG AACGGCTACA ACGCACTGCG CACGCAACTG AATACGCTGA CCAACATCGA CACCAGCAAC AGCGCCAACA ATGGCCCGCT GGCAGGCGAT GTCAGCACCA AGACGCTGAT CAACCAGATT ACCGACGTGC TGGGGCAGGC GATTGGTACG GGCACGTATC AATCGCTGGG CAGCGTGGGC GTGACGATGA ATGCCGACGG TACGCTGTCG GTGGACAACA CAAAGCTGTC CGCCGCCATT GCGGCTTCAC CCAGCCAGGT CACGGGCCTG TTTGCGGGCA CGGGTACGGC CACCGATTCG CTGGTGAGCG TGCCGTCCTT CACGGACACC ACCCAGGCGG GCACCTACGC CGTCAGCGTC ACGCAGTTGG CGACGCAGGG TTCGCTTTCG GGCTCCGCTG CGGCCAACAC CACCATCACG GCGGGCGTGA ACGACACGCT GGCGTTCAAC ATCAGCGGCA TGGCCGTCAA CGTGACCGTG CCGGCCGGCA GCTACAGCGC ATCCAGCCTG GCTGCGCAGA TTCAGAGCCA GATCAACGCG TCGACCACGC TGCAGACCGC CAAGGTCACT GCCTCGGTAT CGGCCAATGC CAGCGGCGTC ATGACGATCA CCGATAGCCA GTTCGGTTCG GTCTCGGCGG TGTCGGTGTC GGGCAACGGC GCGGCATCGC TGATGGGCTC GAGCCCCACC GCAGTTGCGG GCCTGGACGT GCAGGGCACC ATCAACGGGG TGGCCGCCAC GAGTTCGGGC CAGAACCTGT ATGGCGCCAC GGGGACGGCG GTCGATGGCC TGACCGTGCA GGTTGCCGGT GGCGCAGTGG GCAGCCGCGG TACCGTCACC GTGCAGCGCG GCTATGCCGC CCAGCTCAAT ACCGTGACGA CGAACCTGCT GTCGTCCAGC GGCATGGTGC AGAACGAGAC GGACGCGATC AACAACTCGC TCAGCTCGCT GGCCAGCCAG ATCAGCGTCA TGCAGACGCG CCTGGACAAC AAGCAGGCCC TGTACTACGC GCAGTTCAAT GCACTGTCGG CCCTGGTGGC CAGCATGACG AATACCAGTA CCTACCTGAC CACGCAGCTC GCGGCTATCC AGAACCAGAC GAAGAGCGGC TAA
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Protein sequence | MATTTTSTTS NYVPPISIPG IGTSIDVNTL VSSLMKVESQ PLTLLQNQQS SYQTQLSAVG TLKSALSTFQ TALSNLTTAS NYSAMKASGY DTSVLSASVT SAAAAGSYAV NVSQLAQSQV LAAQGQTSTT TAIGSGTSTT VSFSFGTVSG GTFSNGKYSG ATFTQNGSLA GGSITINSSN NTLAGIRDAI NSANLGVSAS IVNDGSGNPY RLVLTSTAGG SNSEMKISVS GDSTLQSLLA QDPAGTQNMT EVTTGQNALA TINGIAVQSP TNTLSNVVTG TSFTLAKTGS TTVTVANDPT ATTNAVNSFV NGYNALRTQL NTLTNIDTSN SANNGPLAGD VSTKTLINQI TDVLGQAIGT GTYQSLGSVG VTMNADGTLS VDNTKLSAAI AASPSQVTGL FAGTGTATDS LVSVPSFTDT TQAGTYAVSV TQLATQGSLS GSAAANTTIT AGVNDTLAFN ISGMAVNVTV PAGSYSASSL AAQIQSQINA STTLQTAKVT ASVSANASGV MTITDSQFGS VSAVSVSGNG AASLMGSSPT AVAGLDVQGT INGVAATSSG QNLYGATGTA VDGLTVQVAG GAVGSRGTVT VQRGYAAQLN TVTTNLLSSS GMVQNETDAI NNSLSSLASQ ISVMQTRLDN KQALYYAQFN ALSALVASMT NTSTYLTTQL AAIQNQTKSG
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