Gene Rpic_4742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4742 
Symbol 
ID6285264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1082123 
End bp1083397 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content62% 
IMG OID642619218 
Productglycosyl transferase family 2 
Protein accessionYP_001893253 
Protein GI187926908 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.877502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA TCGAAGCAAT CCAAACCGAA GCGCTGCAGG ACATCGCGCC CGTGAAGCAC 
GACGCGGTCA TCCAGCAGGT TGCGCTGAGC GTCTGCATCC CGACCTACAA CCGCGCCCGC
TATCTCGAGA ATCTGCTTGC AGAACTCGTC TCGCAGATTG GCGAGCTGAA GTTCAGCTAC
GAATTGCTGA TCGGCGACAA CTGCTCGACC GACGCCACCG AAGAGGTCGT GGGCCGCTAC
CAGGACAAGC TGAACATCCG GTATTTCCGC CGCCCGTCGA ACCTCGGCTC GGCAGAAAAC
CTGAACCAGC TCTATCGCAG CGCGCAGGGC AAGTACGTGC TCTACCACGC CGATGACGAC
CTCCCGATCC TGGCCGAAAT CAACAACAAC ATCGACATCT TCGAGCGCAA CCCGGGCGTG
GATGTCATCT TTGCGCCGTG GTTCATTCAC GACTTGCCGA CGCGGCAGGA CGTCACCGCG
TTCTATCGCC AGGACGACAA CTACCTGATC GAGCAGCACG ACTACGCCAA GCTGCTGGCA
CTGGTGTTGT CGCACCACCT CTTTCCGGAG ATCTACCTGG CGCGCCGCGA GGTGATGGAC
CGCATCTACT TCAGCGCGCC GGAACCTGCG TTCTACGCCT TCGTGCACGC GGCCGAAATG
CTCGGCTCCA GCGCGGTGTA CTTCAGCAAG ACGCCGTTCT ATCGTTCGGT CTCGCGCTAC
TTTGCCGACG AGACCCGCGC CCAGGCCGGC AACGAAGAAG TGAAACACGC GTGGGACCGC
TATCGCGGTG GTCTCGAATA TCTGTTCGGC AAGTTCTCGC ACACGCTGCC GGCCGCCGAG
CGCCCCGAAT GGCTGAACGC CATCAACCAG TTCGTGCTGG CACGCATGAA GGTTGCGCTG
CGCCTGCGCA CGCATGAAGG CGGCAACTGG ATCGACAACT ACTACATCGC CAACCGCGTC
CGCGCGCTGG GTGAAGTGTC CGATCTTCCC GCACCGTATG ACCTGTACCG TGTCAACGCG
GCGTTCGAAT ACGTGACCAA GCTCGACCCG TTCAAGCCCG AGCCGCCCAA GTACGCCACG
CTGCGCCGCG CGCCGCTGCA GGTCTTCCAC CACGCGCACG GCTTTGCCGA CACGGAGTTC
CTGGTGCTCG ACGACGATGA CGCCATTCCG CATCACACCA TCGTCGTCAC GCCGATCCCG
ATGGACATTG CGGTGCCTGC CGGCCGCGAA GTCCGTTTCG TGTCGGAACT CGAAACGCTC
GCCAAATTCC CCTGA
 
Protein sequence
MSEIEAIQTE ALQDIAPVKH DAVIQQVALS VCIPTYNRAR YLENLLAELV SQIGELKFSY 
ELLIGDNCST DATEEVVGRY QDKLNIRYFR RPSNLGSAEN LNQLYRSAQG KYVLYHADDD
LPILAEINNN IDIFERNPGV DVIFAPWFIH DLPTRQDVTA FYRQDDNYLI EQHDYAKLLA
LVLSHHLFPE IYLARREVMD RIYFSAPEPA FYAFVHAAEM LGSSAVYFSK TPFYRSVSRY
FADETRAQAG NEEVKHAWDR YRGGLEYLFG KFSHTLPAAE RPEWLNAINQ FVLARMKVAL
RLRTHEGGNW IDNYYIANRV RALGEVSDLP APYDLYRVNA AFEYVTKLDP FKPEPPKYAT
LRRAPLQVFH HAHGFADTEF LVLDDDDAIP HHTIVVTPIP MDIAVPAGRE VRFVSELETL
AKFP