Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4736 |
Symbol | |
ID | 6285229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1077158 |
End bp | 1077751 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642619212 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001893247 |
Protein GI | 187926902 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0868084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.202377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCT TCACCATCCA ACCGACACCG CTGGCCGGCG TGGTCGAGAT CAGCCGCAAG GTCATCGGTG ACCATCGCGG CTACTTCACG CGCTTCTTCT GCGCAGACGA ACTCGCCGCC GCCGGCTTTG ACAGCCCGAT CGCGCAAATC AATCACTCGT ATTCCGCCAA GCGCGGCACC GTGCGCGGGC TGCATTTTCA GTACCCCCCG CATGCCGAGA TCAAGCTCGT GAGCTGCGTG CGTGGCCGTG TCTTTGATGT GGCCGTTGAC CTGCGTGCAG GCTCGCCGAC GTTCCTGCAA TGGCATGCGG TGGAGTTATC CGCCGAACGC CACAACAGCC TGCTGGTGCC GCGCGGCTTT GCCCACGGCT TCCAGGCGCT GGAAGACGAT TGCGAGCTGC TGTATCTGAC CTCGACGCCA TACGCGCAAG CCGCCGAAGA CGGCATCAAC CCGACCGACA GCCGCCTAGG CATCGCCTGG CCGCTCGACA TTACCGAATG CTCCGACCGG GACCGCAACC ATCCGCCGCT GACGAACGCG TTTGCGGGCA TTGCGCTGCG AGCCCTGAAT CCTGAACTGC AGGAACAGCC ATGA
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Protein sequence | MSRFTIQPTP LAGVVEISRK VIGDHRGYFT RFFCADELAA AGFDSPIAQI NHSYSAKRGT VRGLHFQYPP HAEIKLVSCV RGRVFDVAVD LRAGSPTFLQ WHAVELSAER HNSLLVPRGF AHGFQALEDD CELLYLTSTP YAQAAEDGIN PTDSRLGIAW PLDITECSDR DRNHPPLTNA FAGIALRALN PELQEQP
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