Gene Rpic_4732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4732 
SymbolfliE 
ID6285064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1073787 
End bp1074122 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content60% 
IMG OID642619208 
Productflagellar hook-basal body protein FliE 
Protein accessionYP_001893243 
Protein GI187926898 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.132545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTA CGAACGCCAA CTCGGTGGTG TCGCTGATGA ACAGCGTGCT GGCGCCGTCC 
AGCCAGGTCG GCGGCATTGG CGGCAGCACC GGCGGCGCCG ATTCGAAGGT CAGCGTCGAC
TTCGGCTCGG TGCTCAAGTC GTCGCTGGAC AGGGTCGATG CCTCGCAACA GAAGGCCGAA
GCCGTTTCGC GCAGCTTCGA GATGGGCAAC AACGATGTGG ACCTCCACGA CGTGATGCTG
TCGCTGCAGA AGGCCAACAT CGACTTACAG ACCGCCGTGC AAGTGCGCAA CAAGCTGGTC
TCGGCCTATC AGAACATCAT GAGCATGTCG ATCTGA
 
Protein sequence
MDITNANSVV SLMNSVLAPS SQVGGIGGST GGADSKVSVD FGSVLKSSLD RVDASQQKAE 
AVSRSFEMGN NDVDLHDVML SLQKANIDLQ TAVQVRNKLV SAYQNIMSMS I