| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4731 |
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| Symbol | |
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| ID | 6285200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 1071708 |
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| End bp | 1073543 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642619207 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001893242 |
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| Protein GI | 187926897 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.722282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0591496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACGA CAGCCGATTC GGTTGCTGTC GCCGACACGC TCGGTACGGT GGATATGCCG
GCGGTGGGCC AAGGCGCGAT GACGCGCCAG CATGCGGGAG CGCTGGGCGC TCTGGGTCCG
CTTGGCCGTC TGTCGCCGCG CCTGCTCATG ATGATCGGGG GCGCCGCCCT GGTGGCCGTG
CTCGCCGCTG TGATGCTGTG GAGCCGCGCG CCCGACTACC GCGTCCTGTT CAGCAATGTC
AGCGACGCGG ATGGCGGAGC CATCATTGCT GCATTGCAGC AGATGAATGT GCCGTATCGC
TTTGCCGACG GCGGCACCGC CATCATGGTG CCGGAAGCCA ACGTGCACGA AACACGCCTG
AAGCTGGCGT CGCAAGGGCT GCCCAAAGGT GGCCTGGCCG GCTTCGAGCT GATGGAGAAC
CAGAAATTCG GCACCAGCCA GTTTGCCGAA CAGGTCAATT ACCAGCGCGC CCTGGAGGGC
GAGCTTGCCC GCACGATCCA GGCCATGCAG GAGGTGCAGT CTGCCCGCGT GCACCTGGCG
CTGTCCAAGC CGTCGGTGTT CGTGCGCGAG CAGGCCAAGC CCAGCGCTTC GGTGCTGCTG
ACGCTGTATC CGGGCCGCAT GCTTGATCGC TCGCAGGTGC AGGCCATCGG CCACCTGGTG
TCGAGCAGCG TGCCGAACCT GCCGCTCGCC AACGTGACGG TGGTGGATCA AGCGGGCCGC
CTGCTGTCGT CGTCGTTCCA GGACAACGCG TCGGGCCTCG ACCCGACGCA GCTGAACTAC
GTGCGCGAGA TCGAGCAAGG CTACATCAAG CGCATCGAGG CCATCCTCGG CCCCGTGGTG
GGCGATGACA ATGTGCGCGC CCAGGTGACG GCCGACGTTG ACCTGGACAA CACCGAACAG
ATGGCCGAGA CGTATCGTCC GAACCAGGAT CCGTCCACGG CCGCCGTGCG CAGCACGCAC
ACCGCAGAAT CGACGCAAAA CAAGGCGGAT GCGCAGGGCG GCGTGCCGGG AGCGCTGTCG
AACCAGCCGC CGACCGCGCC GCGCATGCTG CCGACCGCAC CGGCCCCGGC CTCGCAGCCG
GCCGCGGCGG GACCGAATGG CGCCAACGGC CAGGCGCAGC AACCGGCGGC GGCAAATACG
AACGCCACCA CCACGAACGG CGCGACATCG AGCACGCGCG ATACCACCAC CAACTACGAA
GTCGACAAAA CGGTGCGCCG CACCCGCGCT GCCGTGGGGA CGGTCCGCCG CCTTTCAGTG
GCCGTGGTGG TCAACTACCG TGCCGACGGC AAGACCTGGA AGCCGCTGTC CGATGCGGAA
ATGGCCAAGC TCAACGCGCT GGTCAAGGAC GCCGTGGGCT TTGACGCCAA GCGTGGTGAC
TCCGTGAACG TGGTCAACAG CCAGTTCTCG GGCACGCTGC CAGTGCCAAA GGACGACCTG
CCGCTCTGGA AGCAGCCGGA GATGATTCAG TACGCCATTC AGGCAGCCAA GTACCTGGCG
CTGGCGATCG GCTTCCTGAT CCTCGTCTTT GCGGTGATCC GCCCGCTGAT CCGCTCGCTG
AACAAGAAGG ACGCGCCTGC GACGCCCACA TTCGTCGGCC GGGAAGGCGA AGACCCGAAC
GCGCCCATCA TCACCGGCGC TGCGGCGTCG GCCGGGCCGG AGCTGGAGGG CCCGTCGTCA
TCCGCGATCG GCGCCGGCGG CGAGGACGTA CCCGACAGCC TGCCGCAGCT CAAGAACGCA
GACTTCGAGC ACAAGCTGGA GACGATGCGC CGCGTCGCCC AGCAGAACCC GCGTGCCGTC
GCGGCCGTCA TCAAGCAATG GGTGAGTAAC GAATGA
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| Protein sequence | MPTTADSVAV ADTLGTVDMP AVGQGAMTRQ HAGALGALGP LGRLSPRLLM MIGGAALVAV
LAAVMLWSRA PDYRVLFSNV SDADGGAIIA ALQQMNVPYR FADGGTAIMV PEANVHETRL
KLASQGLPKG GLAGFELMEN QKFGTSQFAE QVNYQRALEG ELARTIQAMQ EVQSARVHLA
LSKPSVFVRE QAKPSASVLL TLYPGRMLDR SQVQAIGHLV SSSVPNLPLA NVTVVDQAGR
LLSSSFQDNA SGLDPTQLNY VREIEQGYIK RIEAILGPVV GDDNVRAQVT ADVDLDNTEQ
MAETYRPNQD PSTAAVRSTH TAESTQNKAD AQGGVPGALS NQPPTAPRML PTAPAPASQP
AAAGPNGANG QAQQPAAANT NATTTNGATS STRDTTTNYE VDKTVRRTRA AVGTVRRLSV
AVVVNYRADG KTWKPLSDAE MAKLNALVKD AVGFDAKRGD SVNVVNSQFS GTLPVPKDDL
PLWKQPEMIQ YAIQAAKYLA LAIGFLILVF AVIRPLIRSL NKKDAPATPT FVGREGEDPN
APIITGAAAS AGPELEGPSS SAIGAGGEDV PDSLPQLKNA DFEHKLETMR RVAQQNPRAV
AAVIKQWVSN E
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