Gene Rpic_4728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4728 
Symbol 
ID6285191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1068520 
End bp1069959 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content68% 
IMG OID642619204 
Productflagellar protein export ATPase FliI 
Protein accessionYP_001893239 
Protein GI187926894 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.696414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0278522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTG AGACCGTGCA GTCGCCAGCG CAGAGCGCCA GCAGCAACCC GAACGTGCGC 
GTGTGGCAGT CGCATCTGCG TCAGACCGCG CAGCGTGCTC GCCTCGCGCG CCCGGTGGTG
ACGTGCGGCA AGCTCACCCG CGTGGCGGGG CTCGTCATGG AGGCCGTTGG CCTGAAGCTG
CCCGTGGGTA GCGCCTGCCG GGTAGAACTG CCGCATGGCC GCCACGTGTT GGCCGAAGTG
GTGGGCTTTG CCGAAGAGCG CGCCTTCCTG ATGCCGCAGA CGGACCTGGT GGGCGTGGTG
CCCGGTGCAC GGGTGTTTCC GCTTGAAGCG CAGCACCTGC CCGCTGACGC GGCCGATCCA
ACCATCTCGC ACAGCAAGTT CTTGCCCGTG GGCCCGCGCC TGCTGGGCCG CGTGGTCGAC
GCCAATGGCG AGCCGCTCGA CGGCAAGGGC CCGCTTGGCA ACCCGGACGA ACTTGCCTGG
GGCACGCTTG CCCCGGCGCC GCTGAACCCC CTCAAGCGCA AGCCGATCGA GAATGTGATG
GACGTGGGCG TGCGGGCCAT CAACGGCTTG CTCACTGTCG GTCAGGGGCA ACGCCTCGGC
CTGTTCGCCG GCTCCGGCGT CGGCAAGAGC GTGCTGCTGG GCATGATGGC CCGCTATACG
CAGGCCGACG TGGTGGTGGT GGGCCTGATC GGCGAGCGCG GCCGCGAAGT GAAGGAATTC
ATCGACGAGA TTCTTGGCGA CGAAGGCCTG GCACGCTCGG CCGTGGTGGC TGCACCGGCC
GATACCTCGC CGCTGATGCG CCTGCAGGGT GCCGCCTACG CACACACGAT TGCCGAATAC
TTCCGCGACC GCGGCTGCAA CGTGCTGCTG ATCGTCGATT CGCTCACGCG TTACGCGATG
GCACAGCGCG AAATCGCCCT GGCCATCGGC GAGCCGCCGG CCACCAAGGG CTATCCGCCC
TCGGCGTTTG CCAAGCTGCC CGCGCTGGTT GAGCGTGCCG GCAACGGCAT GGTGGATGCC
GACGGGCGCG GAGGCTCCAT CACCGCGTTC TACACCGTGC TGGCCGAAGG CGATGACCAG
CAGGACCCGA TTGCCGATGC AGCGCGCGCC ATTCTGGACG GCCACTTCGT GCTCTCGCGC
AAGTTGGCGG AGCAGGGCCA CTACCCGGCC ATCGATATCG AACAGTCGAT CAGCCGCGTG
ATGTCGGCCA TCGTGCCGCG CGAGCAGCTC GACACGGCGC GCCGCTTCAA GCAGCTCTAC
GCCCGCTATC AGCGCAACCG CGACCTGATT GCCGTAGGCG CCTACGCACG TGGCAGCGAC
CCGGTGACCG ACCAGGCCAT CGCGCGCTAC CCCGACATGG AAGCATTCCT GCAGCAAGGC
ATGTTCGAGA ACGAAAGCCG CGAGCACACG CTGCAGAAGA TGCAGGGAGT GCTGGCCTGA
 
Protein sequence
MSLETVQSPA QSASSNPNVR VWQSHLRQTA QRARLARPVV TCGKLTRVAG LVMEAVGLKL 
PVGSACRVEL PHGRHVLAEV VGFAEERAFL MPQTDLVGVV PGARVFPLEA QHLPADAADP
TISHSKFLPV GPRLLGRVVD ANGEPLDGKG PLGNPDELAW GTLAPAPLNP LKRKPIENVM
DVGVRAINGL LTVGQGQRLG LFAGSGVGKS VLLGMMARYT QADVVVVGLI GERGREVKEF
IDEILGDEGL ARSAVVAAPA DTSPLMRLQG AAYAHTIAEY FRDRGCNVLL IVDSLTRYAM
AQREIALAIG EPPATKGYPP SAFAKLPALV ERAGNGMVDA DGRGGSITAF YTVLAEGDDQ
QDPIADAARA ILDGHFVLSR KLAEQGHYPA IDIEQSISRV MSAIVPREQL DTARRFKQLY
ARYQRNRDLI AVGAYARGSD PVTDQAIARY PDMEAFLQQG MFENESREHT LQKMQGVLA