Gene Rpic_4724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4724 
Symbol 
ID6285162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1064293 
End bp1064841 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID642619200 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001893235 
Protein GI187926890 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0556271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCG CACCGATCTC CGTCGATTCC CACTCCGCGC CCGGCACCCA AACCATCGAC 
GTCCGTCCGG CCACACTGGC TGACCTGCCG GCCATCGTGG CGATCTACGC GCACCATGTG
CGCACCGGGA CCGCCAGCTT TGAGACCGAC CCACCCGACT TGGCCGAGAT GACGCGCCGC
TTCCAGGCGT TGCAGGATGC CGGCATGCCC TACGTGGTGG CAGAGGCGGA CGGCACGCTG
CTCGGCTACG CCTACGCCGG CCCGCACCGC GCGCGGCCGG CTTATCGAAA CACGGTGGAA
GATTCGATCT ATCTGGATAC CGCCGCGCAG GGGCGAGGCG TCGGCACGCT ATTGCTGCAG
GCGTTGATCC GGGATTGCGA GGCGCGCGGC TTCAAGCAAA TGGTGGCGGT GGTGGGAGGC
GGCCATCAGA ACCCTGGCTC CGCGCGGCTG CACGCGCGCT GCGGCTTCCG CGAGGTGGGC
GTCCTGGAAC ATGTGGGCTA CAAGTTCGAT CGCTGGCTGG ATTGCCTACT CATGCAGCGG
TCGTTGTGA
 
Protein sequence
MSSAPISVDS HSAPGTQTID VRPATLADLP AIVAIYAHHV RTGTASFETD PPDLAEMTRR 
FQALQDAGMP YVVAEADGTL LGYAYAGPHR ARPAYRNTVE DSIYLDTAAQ GRGVGTLLLQ
ALIRDCEARG FKQMVAVVGG GHQNPGSARL HARCGFREVG VLEHVGYKFD RWLDCLLMQR
SL