Gene Rpic_4712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4712 
Symbol 
ID6285091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1054551 
End bp1055672 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content65% 
IMG OID642619188 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001893223 
Protein GI187926878 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.690565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00787057 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGACG TCGTCATCAG CGGTACGGGC CTGTGGGTCG CGCCGGAGGT CATCACCAAC 
GAGGAGCTGG TTGCCTCCTT CAATGCCTAC GCGCAGCGCT ACAACGTCCA GCATGCGGAC
GCGATTGCCG CAGGTGAGCT CGTGCCGTTG CAGGAATCGT CGGCGGAGTT CATCGAGAAG
GCATCCGGTA TCCGCCAGCG TTATGTGGTG GAGAAGAGTG GCGTGCTGGA CCCGACGCGC
ATGCGTCCGA AGCTCGCCCC GCGACCGGAC GATGCGCTGT CGCTGCAGGC CGAGATCGGC
GTGGCGGCTG CGCGCGACGC CCTGGCTGCT GCCGGCCGAG ACGCCAGCGA CGTGGACATG
CTCATCTGCG CGACGTCGAA TTTCCAGCGC CCGTATCCGG CGCTGGCGGT GGAAATCCAG
AACGGCATCG GCGCCAGCGG CTACGCGTTC GATATGAACG TTGCGTGCTC GTCGGCCACG
TTTGGGCTGG AGCAGGCCAT CAACGCCGTG CGCAGCGGCA CCGCGCGCGC GGCGCTCGTG
GTGAGCCCCG AGGTGACCTC TGGCCACCTC GACTGGAAAG ACCGCGACTG CCACTTCATC
TTTGGCGATG TGTGCACGGC CGTGCTGGTC GAGCGTGCCG AAGACACCCG CTCACCTGAC
GCGTGGCGCG TGCTCGGCAC GAAGTGCGCG ACGAGTTTCT CCAACAACAT CCGCAACAAC
GCCGGCTACC TCTCGCGCAG CGAAGATCGT AATCCCGACG ACCGCGACCA GCTCTTCCGC
CAAGAGGGCC GCAAGGTGTT CAAGGAAGTC TGCCCGATGG CCGCGGAGCA CATCGCTGCG
CATCTGCAAT CGCTTGGCCA CACACCTGCC GACGTGCGCC GCTTCTGGCT CCACCAGGCC
AATCTGGCGA TGAACCAGCT GATCGGCAAG CGTCTGCTCG GCCACGATGC GTCGGCGGAC
GAGGCACCGG TCATCCTGGA CGAATTTGCA AATACGGCGT CGGCGGGTTC CATCATTGCG
TTCCATCGCC ATCGCGCCGA TCTGGAATCC GGCGATGTGG GCATCATCTG CTCGTTCGGC
GCGGGCTATT CAATTGGCAG CGTGGCGGTG CAGAAGCAGT AA
 
Protein sequence
MHDVVISGTG LWVAPEVITN EELVASFNAY AQRYNVQHAD AIAAGELVPL QESSAEFIEK 
ASGIRQRYVV EKSGVLDPTR MRPKLAPRPD DALSLQAEIG VAAARDALAA AGRDASDVDM
LICATSNFQR PYPALAVEIQ NGIGASGYAF DMNVACSSAT FGLEQAINAV RSGTARAALV
VSPEVTSGHL DWKDRDCHFI FGDVCTAVLV ERAEDTRSPD AWRVLGTKCA TSFSNNIRNN
AGYLSRSEDR NPDDRDQLFR QEGRKVFKEV CPMAAEHIAA HLQSLGHTPA DVRRFWLHQA
NLAMNQLIGK RLLGHDASAD EAPVILDEFA NTASAGSIIA FHRHRADLES GDVGIICSFG
AGYSIGSVAV QKQ