Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4674 |
Symbol | |
ID | 6284991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | + |
Start bp | 1006900 |
End bp | 1008855 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642619151 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_001893186 |
Protein GI | 187926841 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3850] Signal transduction histidine kinase, nitrate/nitrite-specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.681088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTC CCGCCACCTC GCACCTAGCC ATGCAGCCGC CCGTGCGGCA ACGCTTGTCG ACGCGCATCG TGGCGGTATC GCTGACTGCG CTCGCCCTGG TGCTGGCGAT GATCGGCGGA ACGCTATGGC TGTCCTGGCA GCTCGAGGGC GCCGGCGCAG CCATCAACGA CACCGGCAGC CTGCGCATGC GCGCCAGCCA GATCGGCGTG GCCGTGCTGG AGGCGCGCCA TGGCCACACC GGCATGCTCG CGCCCCAGGT CGATCACCTG GACGCCACGC TCGCTTCCCT GAAAAAGGGC GATGCAAAGC GGCCGCTCTT CCTGCCCGCC GACACCGAGA TCCGCCGCCA GTTTGACGCC GTCGGCACCG CCTGGCAGAC ACGGCTCAAA CCCAGCATCG CCGCCGACAT CGCCCAGCCG CCGGGCGCGC CTTCCATCTA CCTCACCCAC CTGCCGCACT TCATCGCCCA GGCAGACCAG CTCGTGCGCA TGATCGAGCA GAGCAACGCG CACAAGACGA CGCTGCTGAG GCTGTCGCAG TTCGCGTTGG CCGTGATGGC ATGCGTGGGC ACGCTGGCCA TGATCTATCT GCTGTTCCTG TGGATCATCC TGCCTGTGAT GCGTCTGCAG GAAGGGCTGC AGCGCATGGC CGCACATGAA TTCGCGACGC GCCTGTCGGT GGACACCCGA GACGAGTTCG GCCTGCTGGC GCGCGGCTTC AATCGCATGG CCGAGGAGCT GCAGGGCCTG TACGCCGACC TCGCCTCGCG CGTCGCGCAG AAGACCCAGC AGCTTGCGGC CCAGAACCGC GAGTTGTCTG CGCTGTACGA CATCACCGCC TTTCTCAACG TGTCGTCCGA CATCGACGCG CTGTGCCGGG GCTTCCTGCA GCGGGTAGCC GATCAGTTCG GTGCTGCAGG GGGCAGCATT CGGGTCATGG ACCCGGACGG CGAGCGCCTG CACCTGGTCG CCACCGTGGG GCTGCCCGCC GATCTGGAGG AGGCGGAGCA ATGCATGCGG GCCGATACCT GCCTCTGCGG CCAGGCCACG CAGCAGGACG TCGTGGTGGT GCATGACTTC CGCCGCATGC GGCGCGAAGG GCCGACCGCC GCGCCCACGG CGCTGCCCTG CCAGCGCGAG GGCTACACGA CCGTGGCCGT GTTCCGCATC ATGACGCAGC AGGCCGTGCT CGGCACCTTC TCGCTGCATC TGCGCGACAA CCGGCAATTG CCGCCGAACG ATCTGCGCCT GCTGGAAACG CTGGGGCAGC ATCTCGGCAT CGCCCTGGAG AACCTGCGCC TGCAGGCCAA GGCCACGCAG CTGGCGGTGG TGGAAGAACG CAACCTCGTC GCGCAGGGGC TGCACGACAG CATTGCGCAG GGGCTCAACT TCCTGAACCT GCAGGTGCAG ATGCTGGACG CCGCCATGCG CGATGCCAAT CTTGACGAAG CGCGCGAGAT CGTTCCGCTC CTGCGCTGCG GTGTGGAAGA GAGCTACCAG GACGTGCGCG AACTGCTGCT GAACTTTCGC TCCAAGCTGG AGAGCGGCGA ACTGCGCCCG GCGGTGGAAC AGACGCTGGC CCGCTTTGCG CAGCAAAGTG GCATCGTCCC CTCGCTGCAC TACCACGAGG CCGGCGGCGC GCCACTGCCT GCCGACCAGC AGTTGCAAGT CCTGTTCATC CTGCAGGAGG CGCTGTCCAA CGTGCGCAAG CACGCCATGG CCAGCCGCGT CGATGTCACC ATCACCAATG GCCGCGACTT TGAGCTGCGC GTGCAGGACA ACGGCCGCGG CTATGACGCC CGCGAAGTGG CCGAACGCAC CCAGGCCCAC GTCGGCCTGA ACATCATGCG CGAGCGCGCC GCCTACCTGC TGGCGCAATT GCAACTGGAG GGCCGCCCCG GCCAGGGCGC CTCCGTCACC TTGCGGCTGC TCGAGCCACA GCGCCAAGCC GCCTGA
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Protein sequence | MNAPATSHLA MQPPVRQRLS TRIVAVSLTA LALVLAMIGG TLWLSWQLEG AGAAINDTGS LRMRASQIGV AVLEARHGHT GMLAPQVDHL DATLASLKKG DAKRPLFLPA DTEIRRQFDA VGTAWQTRLK PSIAADIAQP PGAPSIYLTH LPHFIAQADQ LVRMIEQSNA HKTTLLRLSQ FALAVMACVG TLAMIYLLFL WIILPVMRLQ EGLQRMAAHE FATRLSVDTR DEFGLLARGF NRMAEELQGL YADLASRVAQ KTQQLAAQNR ELSALYDITA FLNVSSDIDA LCRGFLQRVA DQFGAAGGSI RVMDPDGERL HLVATVGLPA DLEEAEQCMR ADTCLCGQAT QQDVVVVHDF RRMRREGPTA APTALPCQRE GYTTVAVFRI MTQQAVLGTF SLHLRDNRQL PPNDLRLLET LGQHLGIALE NLRLQAKATQ LAVVEERNLV AQGLHDSIAQ GLNFLNLQVQ MLDAAMRDAN LDEAREIVPL LRCGVEESYQ DVRELLLNFR SKLESGELRP AVEQTLARFA QQSGIVPSLH YHEAGGAPLP ADQQLQVLFI LQEALSNVRK HAMASRVDVT ITNGRDFELR VQDNGRGYDA REVAERTQAH VGLNIMRERA AYLLAQLQLE GRPGQGASVT LRLLEPQRQA A
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