Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_4668 |
Symbol | |
ID | 6284982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010678 |
Strand | - |
Start bp | 998685 |
End bp | 999353 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642619145 |
Product | protein of unknown function DUF161 |
Protein accession | YP_001893180 |
Protein GI | 187926835 |
COG category | [S] Function unknown |
COG ID | [COG1284] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.116519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCC TCGAAGTCAC CCGGCACAGT ACGCTCGAAG ACGTGCTGGC CATCGTCACC GGCACGCTGT TCGTGTCGCT TGGTATCACG CTGTTCAAGC AGGGCGGCCT GCTCTCGGGT GGGACGGCGG GCGTGGCCTT CCTGATCCAC TACGCCACGT CGCTGCCGTT CGGCGCCGTG TTCTTCACGA TCAATCTGCC GTTCTACTAT CTGGCGGTGC GGCGCATGGG CTGGCGCTTT ACCTGCAAGA CGTTCTGTGC GGTGGCACTG GTGTCGTGGC TCAGCGAGGT GCATGCGCAC TTCGTGCATC TGGATACGCT CAACCCGCTT TACGCCGGCG CCATTGGCGG CACGCTGATG GGCGTCGGGC TGATCGTGCT GTTCCGCCAT CAGGCCAGCC TGGGCGGCGT CAACATCGTC GCGCTGTATC TGCAGGAAAA GTACGGCATT CGCGCAGGCA AGTTCCAGAT GGCGGTGGAC GTGGGGATCG TGCTGACCTC GCTGTTCGTG GTCAGCCCGA TGGCGTTGGC GGCCTCGCTG GTGGGCGCGG TGGCATTGAA CCTGAGCATT GCGCTGAACC ACCGGCCTGG CCGCTACCCG GCTGCGCAGG CTGCCCTTGG CGCCGCGCCC GCAGACCGCC ACGGCCCGCA CAAGCGTTCC GTGGCGTGA
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Protein sequence | MKALEVTRHS TLEDVLAIVT GTLFVSLGIT LFKQGGLLSG GTAGVAFLIH YATSLPFGAV FFTINLPFYY LAVRRMGWRF TCKTFCAVAL VSWLSEVHAH FVHLDTLNPL YAGAIGGTLM GVGLIVLFRH QASLGGVNIV ALYLQEKYGI RAGKFQMAVD VGIVLTSLFV VSPMALAASL VGAVALNLSI ALNHRPGRYP AAQAALGAAP ADRHGPHKRS VA
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