Gene Rpic_4663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4663 
Symbol 
ID6284942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp992446 
End bp993330 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID642619140 
Productpeptidase U32 
Protein accessionYP_001893175 
Protein GI187926830 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0826] Collagenase and related proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG AGATTTCGCT TGGTCCGCTG CTGTACTACT GGCCGCGGTT ACAGACGTTC 
GACTTCTACG CAGAGGTCGC GGCCAGCCCT GTCGACATCG TCTATGTGGG CGAGACGGTC
TGCAGCCGCC GCCACGAGCT GCGGGCGGAC GACTGGCTCG ATATCGCGGC CATGCTGCGC
GAGGCCGGCA AGTCGGTGGT GCTATCGACC CGGACGCTGA TTGAAACCAG TGCCGAGGCG
CAGGCGTTGC GCAAGCAATG TCAGCAGGAC GACTGGCTGG TGGAGGCCGG CGAGCTGGGT
GCCGTCAGGC TGCTTGGCGG CCGCCCGTTC GTGGCCGGGC CGCACTGCAA CGCTTACCAC
GGCGCCACGC TTGCCTGGCT GGCTGGGCTG GGAGCGATAC GCGCGGTCAT GCCGCTGGAA
ATGAGCCAGG CCACGCTGGC TGAGCTGATG CGCGAAAAGC CCGACGCACT GGAAATTGAA
GCGATGGTGT GGGGCCGGTT GCCTTTGGCC TTCTCGGCGC GCTGCTTTAC GGCGCGGCAT
TTCCGTCTCA ACAAGGACGA TTGCGGCTTC CGCTGTATCG AGCACCCCGA CGGTCTTGCC
GTGCGCACGC GCGAGGGGCA GGAGTTTCTC GCCATCAACG GTATCCAGAC GCAATCGGGG
CAATGCCTCG ACATGCTCGA CCAGGCGCCC GCGCTGTCGG CGCTCGGCGT GAAAGTCCTG
CGCGTGAGTC CGCAGTCGCG CGGCACACTC GACGCGGTGG CCGCGCTGGA TGCGCAGCGC
CGTGGCGAGC CCGCGCCCGC GGTGCAGCCG CCCGAAGGCA TCGGCCGCTG CAACGGCTAC
TGGCATGGCC GATCCGGCAT CGACTGGCTG GAGACCCCGC GATGA
 
Protein sequence
MSYEISLGPL LYYWPRLQTF DFYAEVAASP VDIVYVGETV CSRRHELRAD DWLDIAAMLR 
EAGKSVVLST RTLIETSAEA QALRKQCQQD DWLVEAGELG AVRLLGGRPF VAGPHCNAYH
GATLAWLAGL GAIRAVMPLE MSQATLAELM REKPDALEIE AMVWGRLPLA FSARCFTARH
FRLNKDDCGF RCIEHPDGLA VRTREGQEFL AINGIQTQSG QCLDMLDQAP ALSALGVKVL
RVSPQSRGTL DAVAALDAQR RGEPAPAVQP PEGIGRCNGY WHGRSGIDWL ETPR