| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4642 |
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| Symbol | |
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| ID | 6285180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | - |
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| Start bp | 969388 |
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| End bp | 972048 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642619119 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001893154 |
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| Protein GI | 187926809 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0800652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCGAT TGACGATCGA CGGGGCGCCA TGGGAGACGG CTGAAGGCAC GTTGCTGATC
GACGCGCTGT CGGCAGCCGG CAGCGCGGTA CCAAACCTGT GCCATGACAA GCGCCTGATG
CCGTTCGGTG GATGCCGTCT CTGCGTTGTA CACGTGGATG GCTACGCGAA CCCCGTTGCA
AGCTGTACCA CCGAAGTGGC GGAAGGCATG TCCGTCCAGA CGGACAGCAG CACACTGCAG
GCGCTGTGCC GCACGAATCT CGAACTGATT GCTGCCCGCT ATCCGAGGTC GGCATACGCG
GCAGACCCGC GTCACCCGTT TCACCGATTG CTGACCGACT ACGGCGTACC GCCGGGCGGC
AAGCGCGAAG ACGGGCTGTT CCGGGATGAC AGTCACCCTT ACCTGGGCGT CAGCATGGAC
CGCTGCGTCT ACTGCCAGCG CTGCGTGCGC ATTTGCGAAG AGGTGCAGGG GCAGTTCATC
TGGGAGGCGA TCGGCCGTAA CGATGCCTCC CGCATTGCGG TTGGCCGAGG CCCGACGCTG
CGCGAGGCAG GCTGCGTGAG TTGCGGCGCC TGCGTGGACA CCTGCGCGAG CGGCGCCCTG
TTCGACAAGC GTCAGGTCTC CAGGCCCACC GCCTGGACGC GCACAACCTG CGCGTATTGC
GGCGTGGGTT GCCAGATGGA TGTCGGCGTG GCCAACGGCC GGGTGGTGAC GGTGCGCCCC
GCCGATCGTC CGGTCAATCG CGGACATCTA TGCGTCAAGG GGCGCTATGC ATTCGAGTAC
AACCACGCCC CGGATCGCGT GACCCAACCG ATGCTGCGGC GGGATGGGCG GTGGCAGCCC
GTGGGATGGG GCGAGGCGCT CGACTTTGCG GCAACACAAT TGCAGGCCAT CGTCATGCGT
CATGGGCCCG ATGCGGTCGG TGTGCTGGCG TCGTCGCGCG CCACCAACGA AGAGAACTAC
CTGGCGCAGA AGTTTGCCCG CGTGGTGCTC GGCACGCATA ACATCGACTG CTGCGCCCGG
GTGTGCCACA CGCCCAGCGC CAGGGCACTC CAGACGATGC TCGGTATCGG CGCGGCCACC
AACAGCTTCG ACGACATCGA GCGCGCGAGC GCTTTTCTGG TCTGCGGAGC GAACCCGACC
GAGAACCACC CCGTGGTCGG CGCACGCATC AAGCAGGCCG TGCTCAAAGG GGCGCGCCTG
GTGGTGATCG ATCCGCGCCG CACCGAGCTG GCCGCGCTGG CCGATGTCCA TCTGCCGGTG
CGCACGGGCT GTAACGTGCC GCTGTTCAAT GCATTGGCCG CGGCCATGAT CGAGGAAGGC
TGGGTGGACC GCGCATTCCT CGCCGAACGC GTCGATGGCT TCGAGGCGTT TGCCGCGCAC
GTCGCCGCGT TTTCACCGGA GCGCGTGGCT GACCTCTGCG GCGTGCCGGC GGCGGCGATC
CGCGCAGCCG CGCGAATCTA TGCGCAGAGC CGGCCAGCCA TGTGCTTTCA TGGCCTGGGG
GTGACCGAGC ATCTGCAGGG CAGCGAAGGG GTGATGGCGC TCGTCAACCT CGCCCTGCTC
ACGGGCAACC TCGGCAAGCC GGGCGCTGGT ATCAACCCGC TGCGTGGCCA GAACAACGTA
CAAGGCGCGG CACAGATGGG GTGCGACCCT TCCGTGCTGA CCGGTGCGCA GTCCATCGCG
CAGGCTGGTG CGCGTTTCGA GCAGGCATGG GGGACCCGGC TGCCCGCAAC GCGCGGCCTG
GACGTACTCG AAATGATGGA TGCGGCTCAG GCAGGGCGCC TGAAGGCCTT GTGGGTCATG
GGCTACGACA TCTATCTGTC GCTGGCCAAC GCGAACGCCA CGGCCGCCGC GCTTGCCGCG
CTAGACCTGG TGATCGTGCA GGACTTGTTC GTCAACCAGA CCGCCGAGGC CTTCGGTACG
GTGTTCCTGC CCGCGGCGTC TTCATTCGAG AAAGACGGCA CCTTCATGAA CTCGGACCGG
CGCGTGCAGC GCGTCCGTGC GGCCACGACG GCCCCCGGGC AGGCACGTCC CGACTGGTGG
ATCATCCAGG CGCTTGCCGC GCGCATGGGC AAGCCCAAGG GGTTCGCGTT CGAGGGGCCG
CAGCAGATCT GGGATGAAGT TCGCGCGCTG TGGCCTGATG GCGCTGGCCT GACGTATGCG
CGTCTGGAGC ACGAAGACCT GCACTGGCCA TGCCTTGACC AAAGTCACCC CGGGACAGCC
GTGCTGCACC GGGACGCGTT TGTCGGCAGC AAGACGGCCA CGTTGGTGCC GGTGCCCTAT
GTGCCGACCC CGGAGCAAAC CGACGATGCC TACCCGCTGC TGTTGACGAC GGGCCGCGTG
CTCGATCAAT TCAATGCGGG CACGATGAGT TGCCGCACGC CCAACGCAGC GCTGCGGCCG
TCGGACACGC TGGATATGGC GCCGGTCGAC GCGGCACGCC TTGGGCTCGT CGAAGGCGAG
ATGGTGCGCG TCTCCAGCCG TCATGGTTCT GCGGCGCTGC CGCTGCATAT CACCGACGCC
ATGCAGGCCG GCCAGCTCTT CTGCAGCTTT CACCGGCCCG ACCTGAGGAT CAACGCATTG
ACATCGCCCG TGCGAGACTG GCTGGTGCAC GCTCCGGAAT TCAAGGTGAC CGCGGTGCGG
GTCGAGAAGG TGGCGGGTTG A
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| Protein sequence | MVRLTIDGAP WETAEGTLLI DALSAAGSAV PNLCHDKRLM PFGGCRLCVV HVDGYANPVA
SCTTEVAEGM SVQTDSSTLQ ALCRTNLELI AARYPRSAYA ADPRHPFHRL LTDYGVPPGG
KREDGLFRDD SHPYLGVSMD RCVYCQRCVR ICEEVQGQFI WEAIGRNDAS RIAVGRGPTL
REAGCVSCGA CVDTCASGAL FDKRQVSRPT AWTRTTCAYC GVGCQMDVGV ANGRVVTVRP
ADRPVNRGHL CVKGRYAFEY NHAPDRVTQP MLRRDGRWQP VGWGEALDFA ATQLQAIVMR
HGPDAVGVLA SSRATNEENY LAQKFARVVL GTHNIDCCAR VCHTPSARAL QTMLGIGAAT
NSFDDIERAS AFLVCGANPT ENHPVVGARI KQAVLKGARL VVIDPRRTEL AALADVHLPV
RTGCNVPLFN ALAAAMIEEG WVDRAFLAER VDGFEAFAAH VAAFSPERVA DLCGVPAAAI
RAAARIYAQS RPAMCFHGLG VTEHLQGSEG VMALVNLALL TGNLGKPGAG INPLRGQNNV
QGAAQMGCDP SVLTGAQSIA QAGARFEQAW GTRLPATRGL DVLEMMDAAQ AGRLKALWVM
GYDIYLSLAN ANATAAALAA LDLVIVQDLF VNQTAEAFGT VFLPAASSFE KDGTFMNSDR
RVQRVRAATT APGQARPDWW IIQALAARMG KPKGFAFEGP QQIWDEVRAL WPDGAGLTYA
RLEHEDLHWP CLDQSHPGTA VLHRDAFVGS KTATLVPVPY VPTPEQTDDA YPLLLTTGRV
LDQFNAGTMS CRTPNAALRP SDTLDMAPVD AARLGLVEGE MVRVSSRHGS AALPLHITDA
MQAGQLFCSF HRPDLRINAL TSPVRDWLVH APEFKVTAVR VEKVAG
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