Gene Rpic_4637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4637 
Symbol 
ID6285166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp961914 
End bp962945 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID642619114 
ProductOxidoreductase FAD-binding domain protein 
Protein accessionYP_001893149 
Protein GI187926804 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.217006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG ACACATTGGA ACCGGCGATG AAACACCAGA TCACCATCGA AGGCGGCTCG 
GCATTTTCAG TCGCCGCAGA CGAAGACACC TTGCTGCGAG GTGCGCTGCG CGCCGGCATC
GCCCTGCCCC ATGAATGCAG CGTGGGCGGC TGCGGCGCAT GCCGCTTCGA CCTGCTCTCG
GGGCTCGTGG AATCCATCTG GCCGGAGGCG CCTGGGCTGT CCGAACGCGA CCGCAAGCGC
GGCAAACACC TCGCCTGCCA ATCGCGCCCG CTGGGCGATT GCACGATCCG CGTGCGCTGC
GACGACACTT ACCGCCCGGT GGTGTCGCCC GGCCGCTGGC CCGCCGTGCT GCAGGCCAGG
CGGGAGCTGA CGCCCGACAT GAGCGAATTC ACGTTCGCAG TACACGCGCC CGCTGAGTTT
CGCCCGGGGC AGTACGCGCT GCTGTATCCG CCGCACGCGC CTGGCGCGCG CGCCTATTCC
ATGTCCAACC TGCCCAACGC AGACGGCATC TGGCAGTTTG TGATCCGGCG CGTTCCGGGC
GGGGCCGGCA GCAACGCGCT GTTCGACCAG GTCGAGATCG GGCAGACCGT CACCCTCGAC
GGGCCCTATG GCCATGCCCA CCTGCGCGAC GACAACGCGC GCGACATCGT GTGCATCGCT
GGCGGCTCCG GACTGGCTCC GATGCTGTCC GTCGCCCGCG GAGCGCTCGC GCAGGAGGGC
GCGCAACGCG TGCACTTCTT CTACGGCGGG CGCTCGCAAC CCGACCTCGG CGCCATGGCG
GCCCTGGATG ACCTGGTGGG CGACAACCGC CTCGCGCTCT CGGTCGTGCT GTCCGCGCCC
GGCCCGGAAC TCGGCTGGCA GGGCCCGACC GGCTTCGTGC ATGCCGAGGT CGAACGGGTG
CTGGTGGCGC CGCTGGACCG CTTCGAGTTC TATTTCGCCG GCCCGCCGCC CATGATCGAA
GCCGTGCAGG CATTGCTGAT GCACACGCAT CGGGTGCCGT TTGAACAGAT GCATTTCGAC
CGCTTCGTCT AA
 
Protein sequence
MANDTLEPAM KHQITIEGGS AFSVAADEDT LLRGALRAGI ALPHECSVGG CGACRFDLLS 
GLVESIWPEA PGLSERDRKR GKHLACQSRP LGDCTIRVRC DDTYRPVVSP GRWPAVLQAR
RELTPDMSEF TFAVHAPAEF RPGQYALLYP PHAPGARAYS MSNLPNADGI WQFVIRRVPG
GAGSNALFDQ VEIGQTVTLD GPYGHAHLRD DNARDIVCIA GGSGLAPMLS VARGALAQEG
AQRVHFFYGG RSQPDLGAMA ALDDLVGDNR LALSVVLSAP GPELGWQGPT GFVHAEVERV
LVAPLDRFEF YFAGPPPMIE AVQALLMHTH RVPFEQMHFD RFV