| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4636 |
|---|
| Symbol | |
|---|
| ID | 6285500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010678 |
|---|
| Strand | + |
|---|
| Start bp | 960887 |
|---|
| End bp | 961876 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642619113 |
|---|
| Product | methane/phenol/toluene hydroxylase |
|---|
| Protein accession | YP_001893148 |
|---|
| Protein GI | 187926803 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGC AAGCTGAAGT CCTCAAGCCG CTCAAGACCT GGAGCCATCT GGCCGCGCGG
CGACGCAAGC CCAGCGAGTA CGAAATCGTC TCGACCAACC TGCACTACAC CACCGACAAC
CCGGATGCGC CGTTCGAACT CGACCCGAAT TTCGAGATGG CGCAGTGGTT CAAGCGCAAC
CGCAACGCAT CGCCCCTGAC CCACCCCGAC TGGAACGCGT TCCGCGATCC GGATGAACTG
GTCTACCGCA CGTACAACAT GCTGCAGGAC GGGCAGGAGA CCTATGTGTT CGGGCTGCTC
GATCAGTTTT CCGAGCGCGG GCACGACGCC ATGCTCGAAC GCACCTGGGC CGGCACGCTG
GCACGCCTGT ACACGCCCGC GCGCTACCTG TTCCACACGC TGCAGATGGG CTCGGCCTAT
CTGACGCAAC TGGCGCCCGC CTCGACCATC TCGAACTGCG CGGCGTACCA GACGGCCGAT
TCGCTGCGCT GGCTGACACA CACCGCGTAC CGCACCAAGG AGCTGTCGCA GACCTTCAGC
GACCTCGGCT TCGGCACCGA TGAACGCCGC TACTGGGAGC AGGACCCGGC CTGGCAAGGC
TGGCGCAAGC TGGTCGAACA CGCGCTGGTG GCGTGGGACT GGGCCGAGTG CTTCGTTGCC
CTGAGCCTTG TGGTACGGCC GGCAGTGGAG GAAGCCGTCT TGCGCAGCCT CGGCGAAGCC
GCCCGGCATA ACGGCGACAC CTTGCTGGGC CTGCTGACCG ACGCGCAACT CGCCGATGCG
CAACGCCATC GGCGCTGGGC CGGCGCATTG GTGCGCATGG CGCTGGAGCA ACCCGGAAAC
CGCGAAGTCA TCACCGGTTG GCTCGCCAAG TGGGAGCCCC TGGCGGATGA AGCCATCGTG
GCCTACTGCG CGGCCCTGCC CGACGCGCCT GCGGCCCAGG CACGCGCAAC CGCTGCCGTG
CGCGAGTTCC GGCACAGCCT CGGCCTGTGA
|
|---|
| Protein sequence | MTTQAEVLKP LKTWSHLAAR RRKPSEYEIV STNLHYTTDN PDAPFELDPN FEMAQWFKRN
RNASPLTHPD WNAFRDPDEL VYRTYNMLQD GQETYVFGLL DQFSERGHDA MLERTWAGTL
ARLYTPARYL FHTLQMGSAY LTQLAPASTI SNCAAYQTAD SLRWLTHTAY RTKELSQTFS
DLGFGTDERR YWEQDPAWQG WRKLVEHALV AWDWAECFVA LSLVVRPAVE EAVLRSLGEA
ARHNGDTLLG LLTDAQLADA QRHRRWAGAL VRMALEQPGN REVITGWLAK WEPLADEAIV
AYCAALPDAP AAQARATAAV REFRHSLGL
|
|---|
| |